Paenibacillus mucilaginosus 3016: PM3016_5247
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Entry
PM3016_5247 CDS
T01757
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PM3016_5247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_5247
Enzymes [BR:
pmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PM3016_5247
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PM3016_5247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Cas3-like_C_2
PIF1
Zot
AAA_30
Zn_ribbon_6
SPOUT_MTase_2
AAA_19
HTH_IclR
SLFN-g3_helicase
T2SSE
ADDB_N
nSTAND_NTPase5
Flavi_DEAD
TrwB_AAD_bind
DAP3
Motif
Other DBs
NCBI-ProteinID:
AFC31960
UniProt:
H6NQW7
LinkDB
All DBs
Position
complement(6270094..6272595)
Genome browser
AA seq
833 aa
AA seq
DB search
MNRSMYAKVIVDVPARPTNRAFDYSIPEHMRELVAVGSRVGVPFGPRTVQGFVVELHPGT
QLDPSKVKPIKTAMDLQPPLTEELVKLASWISRTYLCHEVTALQAMIPGALKAKYERHVK
AAEPGASGLLPLLLPGQEEILAYVRRQETVELQSLMDKFADDAGLVKGLLDEGFLVEIQM
VKDRMSAKKALTVFAPEDPSQLEAWLGELPAKAAKQREVLEHFIRQPEPMKLTDLLTELN
LSAGSVKALADRGWLRIEEVEVQRDPYASRTFKPTSPLPLTPEQAGVYERIRDAVLSERQ
RVFLLHGVTGSGKTEVYLQSIQTCLDQGREAIVLVPEIALTPQMVERFKGRFGNRVAVLH
SRLSHGERYDEWRKIARREVSVVIGARSAIFAPFTKIGLIIIDEEHETTYKQEESPKYHA
RDVAIARAAEHGASVILGSATPSLESMYRTTNEAAAAATPERPAFELLSMPSRVEGRPLP
PVRIIDMREELKSGNRSMFSRDLYKAIEERLHKKEQIVLLLNRRGYATFVMCRTCGYVAD
CPHCDISLTYHQSSRAIRCHYCGYAERELSLCPDCGSEHIRHFGTGTQRVEEELAKLFPG
IRVIRMDVDTTTEKGSHEKWLTMFGNRQADVLLGTQMVAKGLDFPYVTLVGALAADSVLN
LPDFRAAERTFQLLTQVAGRAGRHQLPGEVYVQTYTPEHYSIVSASRHDYMGFMRKEMMM
RRLHNYPPFHRLVLITLSHEQVQLLIRSGEVLAARLKELAEDRRDQGGELEVLGPVASPI
SRIKDRYRFQCMIKYRGDQDIAQIVEQAASVLEDAVKTQKLTVSIDVDPQLLM
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaagcatgtatgcgaaagtgatcgttgatgttccggcccggcccaccaaccgg
gcctttgattacagcatccccgagcacatgagggagctcgtggccgtgggctcgcgggtg
ggggtgcctttcgggccccgcaccgtgcagggcttcgtagtcgagctgcatccgggcacg
cagctcgatccgtcgaaggtcaagccgatcaagacggctatggacctgcagcctccgctg
acggaggagcttgtgaagctcgcgagctggatctcccggacgtacctgtgccatgaggtt
acggcgctgcaggcgatgattccgggcgcgctcaaagccaagtacgagcgccacgtgaag
gcggcggagccgggggcctccggcctgctgcctcttctgcttcccgggcaggaggagatt
ctggcctacgtccggcggcaggagacggtggagctccagtccctgatggacaagttcgcg
gacgacgcgggactggtgaagggactgcttgacgagggcttcttggtcgagatccagatg
gtcaaggaccggatgtccgccaagaaggcgctgacggtcttcgctccggaggatccgtcg
cagctcgaagcctggctcggcgagctgccggcgaaggcggcgaagcagcgcgaggtgctg
gagcatttcatccggcagccggagccgatgaagctgacggatctgctcacggagctgaac
ctgtcggcgggcagcgtgaaggcgctggcggaccggggctggctgcggatcgaggaagtc
gaggtccagcgggacccgtatgcctccaggaccttcaagccgacgtcgcccctgccgctg
acgccggagcaggccggcgtgtacgaacgcatccgggatgcggtgctgtcggagcggcag
cgggtattcctgcttcacggggtcaccggcagcggcaagacggaggtgtacctgcagtcg
atccagacctgtctggatcaagggcgcgaagcgatcgtgctcgtgcccgagatcgccctg
acgccccagatggtcgagcgcttcaaggggcgtttcggcaaccgggtggcagtgctgcac
agcaggctgtcgcacggagaacgctatgacgagtggcgcaagatcgcacgccgggaagtc
agtgtcgtcatcggcgcgcggtcggcgatttttgccccttttaccaagatcggacttatc
attattgatgaagagcacgaaacgacatacaagcaggaagagagccccaagtaccatgcg
cgtgacgtggcgatcgcccgggcggcggagcacggcgcttccgtcattctcggctcggct
acgccgtcgctggagagcatgtaccgcacgacgaacgaagcggcggcagcggccaccccg
gagcgccccgcgttcgaactgctgtcgatgccgagccgggtggaaggccggccgctgcct
ccggtgagaatcatcgatatgcgggaggagctcaagagcggcaaccggtccatgttcagc
cgcgatctgtataaagcgatcgaagaacggttacacaagaaagaacagatcgttttgctg
ctgaaccgccgggggtatgcgacgttcgtcatgtgccgaacctgcggctatgtcgccgac
tgtccgcactgcgatatctcgctgacataccaccagagctcgagggcgatccgctgtcac
tactgcgggtatgccgagcgggagctgtcgctgtgtcccgactgcggaagcgagcatatc
cgccacttcggcaccggaacccagcgggtcgaggaggagctggccaagctgttccccggc
atccgggtcatccggatggatgtggacacgacgacggagaagggctcgcacgagaaatgg
ctgacgatgttcggcaaccggcaggcggatgtgctgctcggcacccagatggtcgccaag
gggctcgacttcccctatgtgaccctggtcggagcgctcgctgcggattccgtgctgaac
ctgccggacttccgggcggcggagcggacgttccagctgctgacccaggtggccggtcgg
gcggggcgacatcagcttcccggcgaagtgtatgtgcagacgtacacgccggagcattac
agcatcgtctccgccagccgccacgattatatgggcttcatgcgcaaagagatgatgatg
cgccggcttcataactatcctccgttccaccggcttgtgctcatcacgctgtcccacgaa
caggtgcagctgctgatccgctcgggcgaggtgctggcggcccggctcaaggagctggcg
gaggaccgccgggaccagggcggggagcttgaggtgctaggtcccgtagcgtcgccgatc
tcgcggatcaaggatagatatcggttccaatgcatgataaaatatcggggagatcaggac
atcgcccagatcgtggaacaggcggcctccgtactggaggacgccgtgaagacacagaag
ctgacggtgtcgatcgatgtggatccccagctgctgatgtaa
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