Paenibacillus mucilaginosus 3016: PM3016_5270
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Entry
PM3016_5270 CDS
T01757
Name
(GenBank) putative ATP-dependent helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03022
Basal transcription factors
pmq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PM3016_5270
09124 Replication and repair
03420 Nucleotide excision repair
PM3016_5270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmq03021
]
PM3016_5270
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_5270
Enzymes [BR:
pmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PM3016_5270
Transcription machinery [BR:
pmq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PM3016_5270
DNA repair and recombination proteins [BR:
pmq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PM3016_5270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFC31983
UniProt:
H6NQZ0
LinkDB
All DBs
Position
complement(6298818..6300509)
Genome browser
AA seq
563 aa
AA seq
DB search
MQFHKDRPLVIQNDFCILLETRHPSFEEVRAGLSRFADLVKSPENIHTYRMSSLSLWNAA
AAGITVEEITDFLERWAKFGIPSAVKTDIRRFVERYGLVRMERTGEDLLLISDDLSVIKE
MVMYKSLRSYGLCQVDARTLRFSPKYRGLLKQELIKLGFPVDDQAGYSRGEELPIRLRDG
GEESPFSLRAYQRAAVDSFYREGGTQGGSGVLVLPCGAGKTVIGIAAMGKLSCATLILTS
NSTSVRQWKREILDKTDVTEDMVGEYTGTQKEVRPITIATYQILTHRKSKDEPFTHMELF
NKRDWGLIVYDEVHLLPAPVFRVTADIQATRRLGLTATLIREDGMEQDVFSLVGPKRYEM
PWKDLESQGWIAAVECVELRVPLPEREMEAYRSASPREQMRMASINPAKLDLVCRLVEQH
KGEQILIIGQYLEQLHDLGSRTGIPVITGSMPSEKREELYDAFRKSAIQELIVSKVANFA
VDLPDAAVAIQVSGSYGSRQEEAQRLGRILRPKAGNNKAYFYTVISEDTREQDFALNRQL
FLIEQGYRYRMEEGTEREEEVAP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcacaaggaccggcctctcgtcatccagaacgatttctgtattctcctggaa
acgcgccatccctcgttcgaggaagtgcgtgcgggcctgtcgcgcttcgccgacctcgtc
aaatcgccggagaacatccacacctaccgtatgtcctcgctgtcgctgtggaatgccgcc
gcggcgggcatcacggtggaggagatcaccgattttctcgagaggtgggcgaagttcggc
attccatccgccgtcaagaccgacatccgccgcttcgtggaacggtacgggctggtccgc
atggagcggaccggcgaagacctgctgctgatctcggacgatctctcggtgatcaaggag
atggtgatgtacaaatcgctgcgttcctacggcctgtgccaggtggatgcgcgcaccctg
agattttcgccgaagtaccggggactgctgaagcaggagctgatcaagctgggctttccg
gtggacgatcaggccgggtactcccggggcgaagagctgccgatccgcctgcgggacggg
ggggaggagagccccttctccctgagagcctaccagcgggccgccgtcgattcgttctac
cgggaaggaggcacgcagggagggagcggcgtactcgtactgccctgcggcgccggcaag
accgtcatcgggatcgcggcaatgggcaagctcagctgcgccacgctcatccttacgtcg
aacagcacctccgtccggcagtggaagcgggagattctcgacaagaccgatgtcaccgag
gatatggtgggtgaatacaccggcacccagaaggaagtccggccgatcacgatcgccacg
taccagatcctgacccaccgcaagtccaaggacgagccgtttacccatatggagctcttc
aataaaagagattggggcctcattgtgtacgacgaggtgcaccttctgccggccccggtg
ttccgggtgacggcggacatccaggcgacgcggcgtctcgggctcaccgccacgctgatc
cgggaggacggcatggaacaggacgttttctcgctcgtgggacccaagcgctacgagatg
ccctggaaggacctcgaatcgcaggggtggatcgccgccgtcgagtgcgtcgagctgcgc
gtgccgctgccggagcgggagatggaagcgtaccgcagcgcttcgccgagggagcagatg
cgcatggcgagcatcaatccggccaagctggatctcgtctgccggctggtcgagcagcac
aagggcgagcagattctgatcatcggccagtatctcgagcagctccatgatctcggcagc
cggaccggcattcccgtcattaccgggtccatgccgagcgagaagcgggaggagctctat
gacgctttccgcaaaagcgccatccaggagctcatcgtctccaaggtggccaattttgcc
gtggatctgccggatgccgcggttgccattcaggtgtcgggcagctacggctcccgccag
gaggaggcgcagcggctgggccgcattctccgcccgaaggcggggaacaataaagcttac
ttttataccgtgatcagcgaagataccagggagcaggacttcgccctgaaccggcagctg
ttcctgatcgagcagggctaccggtaccggatggaggaaggcacggaacgggaagaggag
gtggctccatga
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integrated database retrieval system
