Paenibacillus mucilaginosus 3016: PM3016_5406
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Entry
PM3016_5406 CDS
T01757
Name
(GenBank) PyrAB
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00220
Arginine biosynthesis
pmq00240
Pyrimidine metabolism
pmq00250
Alanine, aspartate and glutamate metabolism
pmq01100
Metabolic pathways
pmq01110
Biosynthesis of secondary metabolites
pmq01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PM3016_5406
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PM3016_5406
00220 Arginine biosynthesis
PM3016_5406
Enzymes [BR:
pmq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PM3016_5406
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
PA
Motif
Other DBs
NCBI-ProteinID:
AFC32106
UniProt:
H6NDQ7
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All DBs
Position
complement(6435549..6438764)
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AA seq
1071 aa
AA seq
DB search
MPKNNSLKKILVIGSGPIVIGQAAEFDYAGTQACQALKEEGYEVVLINSNPATIMTDTNM
ADKVYIEPITLEFVTQIIRQERPDGLLPTLGGQTGLNMAVELARAGVLERENVKLLGTQL
TAIEKAEDRDLFRDLMRELEQPVPESVIVTTVQEAVDFANEIGFPIIVRPAYTLGGTGGG
ICANEEELIETVASGIRYSPINQCLVEKSIAGMKEVEYEVMRDANDNCIVVCNMENFDPV
GVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALSIEGGCNVQFALDPHSYQYYVIEVN
PRVSRSSALASKATGYPIAKMAAKIAIGYTLDEIVNPVTGQTYACFEPTLDYIVSKIPRW
PFDKFTAANRKLGTQMKATGEVMAIGRTFEESIHKAIRSLEIGVHRLCLKDTDKLDQATL
ELRLVKPDDERMFLIAEALRRGYTVQQLQDLTKVDWWFLHKLEKMIKFEAELLQPELTEE
LLLEAKRKGFTDRAIAEIRAAASNGLNLTKEADVRSYRLGLGLKPVYKMVDTCAAEFEAT
TPYYYSTYEVEDEVKETEKQKIVVLGSGPIRIGQGIEFDYSTVHAVWAIQNAGYEAVIIN
NNPETVSTDFNTSDRLYFEPLFFEDVMNIIEREKPIGVIVQFGGQTAINLAAPLAKAGVR
ILGTDLENIDAAEDRKKFEALLRKLDIAQPPGGTVTSVDEAVGMASRFGYPVLVRPSYVL
GGRAMEIVYSDEELLSYMEYAVTINPEHPVLIDRYMLGKEVEVDAICDKETVLIPGIMEH
VERAGVHSGDSISVYPPQTVSEELKAKIVDITTKIARGLQIVGLVNIQFVIFQDEVYVIE
VNPRSSRTVPFLSKVTKIPMANIATRVITGESLASMGYETGLWPEDDYVSVKVPVFSFAK
LRRVDTTLGPEMKSTGEVMGRDKTFAKALYKGFIGSGMKVPPAGAIIATIADKDKEEATE
IFRGFDRLGYRIIATGGTAQTLEDAGLKVTRVHKLSEGTPNILDLIRGGEAHFVVNTLTK
GKTPERDGFRIRREAVENGVVCMTSLDTVKALLHVLESIYFQSTAMPVVHA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaataattcgctcaaaaaaatcctcgttatcggttcgggacctatcgtcatc
ggacaagcggcggaattcgactatgccggcacccaagcctgccaggcactcaaagaagaa
ggctacgaagttgttctgatcaactccaacccggccacaatcatgaccgatacgaacatg
gccgacaaagtatatatcgaaccgatcacccttgaatttgtaacccagatcatccgccag
gagcgtccggacggacttctccctacgctgggaggccaaacgggcctgaacatggcggta
gaactggcacgtgcgggcgtgcttgagcgcgagaacgtcaagctgctcggcacccagctg
acggcgatcgagaaggccgaggaccgcgacctgttccgcgacctgatgcgcgagctcgag
cagccggtgccggagagcgtcatcgtgacgacggtgcaggaagcggttgacttcgcgaac
gaaatcggcttcccgatcatcgtgcgtccggcttatacgctcggcggtacgggcggcggg
atctgcgccaatgaagaagagctgatcgagaccgtcgcttccgggatccggtacagcccg
atcaaccagtgtctggtcgagaaaagcatcgcgggcatgaaggaagtcgaatacgaagtc
atgcgggacgcgaacgataactgtatcgtggtctgcaacatggagaacttcgacccggtc
ggcgtacataccggcgatagtatcgtcgtagcgccgagccagacgctgtccgaccgcgag
taccagatgctccgttcggcatcgctgaagatcatccgcgccctgagcattgagggcggc
tgcaacgtgcagttcgcactggacccgcattcctaccagtactatgttatcgaagtgaac
ccgcgtgtcagccgttcctcggccctggcttccaaggcaaccggttatccgattgccaag
atggcggcgaagatcgcgatcggctacacgctcgatgagatcgtgaacccggtaacgggc
cagacgtatgcctgcttcgagcctacgctcgactacatcgtatcgaagattccgcgctgg
ccgttcgacaagttcacggcggcgaaccggaagctcggtacgcagatgaaggcaacaggt
gaagtcatggcgatcggccggaccttcgaagagtcgatccacaaggcgatccgttccctg
gagatcggtgtacaccgcctctgcctgaaggataccgacaagcttgaccaggcgacgctg
gagctgcgtcttgtgaagccggacgacgagcgcatgttccttatcgccgaggcgctgcgc
cgcggatacaccgtgcagcagctgcaggatctgacgaaggtcgactggtggttcctgcac
aagctcgagaagatgatcaagttcgaagccgagctgctccagccggagctgaccgaagag
ctgctgctcgaagcgaagcgcaaaggcttcacggaccgtgcgatcgccgagatccgcgcg
gccgcaagcaatgggctcaacctgacgaaggaagcggacgtccgttcctaccgcctcggc
ctcggcctgaagccggtctacaagatggtcgatacgtgcgcagccgagttcgaagcaacg
acaccttactactactccacgtatgaagtggaagatgaagtgaaagaaaccgagaagcag
aagatcgtcgtgctcggctccggtccgatccggatcggccagggcatcgagtttgactac
tcgacggttcacgcggtatgggcgatccagaacgcgggctacgaagcggtcatcatcaac
aacaacccggagacggtatcgacggacttcaatacgtccgaccgcctgtacttcgagccg
ctcttcttcgaggatgtcatgaacatcatcgagcgcgagaagccgatcggcgttatcgtc
cagttcggcggccagacggccatcaacctggcggcaccgctggccaaagccggcgtgcgc
atcctgggtaccgatctggagaacatcgatgcggcggaagaccgcaagaagttcgaagcg
ctgctgcgcaagctggacatcgcccagccgccgggcggcacggttacttccgtggacgaa
gcggtgggcatggcttcgcgcttcggttatccggttctcgtccgtccttcgtacgtactg
ggcggccgcgcgatggagatcgtttactccgatgaagagctcctgagctacatggagtac
gccgtgacgatcaatccggagcatccggttctgatcgaccgctacatgctcggcaaggaa
gtggaagtcgacgcgatctgcgacaaagagaccgttctgattccgggtatcatggaacac
gtcgagagagcgggcgttcactccggtgactccatctcggtatatccgccgcagacggtt
tcggaagagctcaaagcgaagatcgtcgacatcacgacgaagattgccagaggcctgcag
atcgtcggtctcgtcaatatccagttcgttatcttccaggatgaagtgtacgtgatcgag
gtgaaccctcgttcctcgcggaccgtgccgttcctgagcaaggtgacgaagattccgatg
gccaacatcgccacccgcgtcatcacgggcgaatcgctcgcgagcatgggctacgaaacg
ggcctgtggccggaagatgattatgtatcggtgaaagtgccggtcttctccttcgcgaag
ctgcgccgcgtagacacgacgctcggaccggagatgaaatcgacaggcgaagtcatgggc
cgcgacaaaacgttcgccaaggcgctgtacaaaggcttcatcggctccggcatgaaggtg
ccgccggccggcgcgattatcgcgacgatcgccgataaggacaaagaggaagcgacggag
atcttccgcggcttcgaccggctcggctaccgcatcatcgcgacaggcggcacggcgcag
acgcttgaggatgccggtctgaaggtgacccgcgttcacaagctgagcgaaggcacgccg
aacattcttgacctgatccgcggcggcgaagcgcacttcgtggtgaacaccctgacgaag
ggcaaaacaccggagcgcgacggcttccggatccgccgcgaagcggtggagaacggcgtc
gtgtgcatgacctcgctcgatacggtgaaggcgctgctccacgtactggagtcgatctac
ttccaatcgacggctatgccggtcgttcacgcttaa
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