Paenibacillus mucilaginosus 3016: PM3016_5578
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Entry
PM3016_5578 CDS
T01757
Name
(GenBank) SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmq
Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_5578
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PM3016_5578
Archaeal homologous recombinant proteins
PM3016_5578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AFC32270
UniProt:
H6NIF9
LinkDB
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Position
complement(6592805..6593983)
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AA seq
392 aa
AA seq
DB search
MRILHTADWHFGRTLEGRSRLPEQEAFVDELVELVRDQNIDLVLLAGDVYDSVNPPAAAE
SLFYDALSRLSDQGRRPVYVIAGNHDHPDRLAAAAPLADRLGVTLVGLPEARVHETHIAR
TGESAVIYMLPYPSESRLKELLSDEAEETVLRAAYSERVRHIAEEQAKRFRPDTVNLLMS
HLYVLGGKETESERPIQVGGAYTVDTQSLSVGAQYVALGHLHRPQNIKAGSLMRYSGSPL
AYSFSEAGQAKSVTVLDIRPGAEPQMEEMFLSSGRPLVHWKAKGGLSEVHQWLEEGKDPT
AWIDLEVHLTETMSLEQIHKLRQTREGFIHIRPVYPEMEAVLQSEAVSATKAPMDELFRR
FYERQTGGAQPEPELVKLFLELLAEEEDDAAV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttacatacggccgattggcattttggccgtaccctggaagggcggagccgg
ctgccggagcaggaggcgttcgtcgacgagctggtagagctggtgcgcgaccagaacatc
gaccttgtgctcctggccggcgacgtctacgattccgtcaaccctccggcagcggccgag
agcctgttctacgacgcgctctcccgcttgtccgatcaggggaggcggccggtgtatgtc
attgccggcaaccatgaccacccggaccgcctggccgcggcggcccccttggcggaccgc
cttggcgtgacgctggtgggcctgccggaagcgcgggtccatgagacgcatatcgccagg
accggcgagtcggcggtgatctacatgctgccttacccgtcggagtcccggctcaaagag
ctgctctcggacgaagcggaggaaacggtgctgcgagccgcttattcggagcgcgtgcgc
catatcgccgaggaacaggcgaagcggttccggccggacacggtcaatctgctcatgagc
catctgtatgtgctcgggggcaaggagacggagtcggagcggccgattcaggtcggcggc
gcctataccgtcgatacccagtcgctctcggtcggtgcccaatacgtggcgctcggccat
cttcaccggccgcagaacatcaaggcggggtcactgatgcgctacagcggctctccgctg
gcctacagcttctcggaagcgggtcaggccaagtcggtcactgtactcgacatccgtccg
ggagccgagccgcagatggaggagatgttcctctcgagcggccggccgcttgtccattgg
aaagccaagggcggactctccgaagtgcaccagtggctggaagaggggaaggacccgaca
gcgtggatcgatctcgaggtccatttgacggagacgatgtcgctggagcagatccataag
ctgcgccagacccgggaagggttcattcatatccgccctgtgtatccggagatggaggcg
gttctgcagtcggaggccgtctcggccaccaaagcgccgatggacgagctgttccgccgc
ttctatgagcggcagacggggggagcccagcccgagccggagctcgtgaagctcttcctg
gagctgctggcggaggaagaagacgacgcagcggtgtag
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