Paenibacillus mucilaginosus 3016: PM3016_5689
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Entry
PM3016_5689 CDS
T01757
Name
(GenBank) LcfA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00061
Fatty acid biosynthesis
pmq00071
Fatty acid degradation
pmq01100
Metabolic pathways
pmq01212
Fatty acid metabolism
pmq02024
Quorum sensing
pmq04146
Peroxisome
Module
pmq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PM3016_5689
00071 Fatty acid degradation
PM3016_5689
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PM3016_5689
09145 Cellular community - prokaryotes
02024 Quorum sensing
PM3016_5689
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmq01004
]
PM3016_5689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmq04147
]
PM3016_5689
Enzymes [BR:
pmq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PM3016_5689
Lipid biosynthesis proteins [BR:
pmq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PM3016_5689
Exosome [BR:
pmq04147
]
Exosomal proteins
Exosomal proteins of breast milk
PM3016_5689
Exosomal proteins of breast cancer cells
PM3016_5689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AFC32373
UniProt:
H6NKI2
LinkDB
All DBs
Position
complement(6720454..6722157)
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AA seq
567 aa
AA seq
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MFDLSGQPWIGQYPASVPPTYDYPHHHLAKFLEDSAARHGDHPALYFMGRTVTYRSLLES
ARRFANGLLGLGVRKGDRVAVMLPNCPQAVIAYYGTLLIGGVVVMTNPLYMPRELEYQLN
DADAKLIVTLDLLCERVQGVMPATGLGHLVVTSLADYLPFPKNVLYGLKLRKDGQKPDIV
YGERVLSFSRLLKTSSPEAVDVQVDAGSDLALIQYTGGTTGRPKGVMLTHLNLVANTIQS
RLWAYRTKEAQEKYLAALPFFHVFGMTVLMNQSVYLAGTLLLIPRFRVEDVLKTIHKCRP
TVFPGAPTMYISLINHPDIRRYDLSSIEFCISGAAPLPHEVQERFESLTGGKLIEGYGLT
EASPVTHANNIWEARKLGSIGIPFPDTEARIVDPQSGEEVPQGQIGELVVRGPQVMAGYW
KRPDETAKVLKDGWLSTGDMARMDEDGYFFILDRRKDLIIAGGYNIYPREVEEVLFEHPD
VEEAVVAGVSDPYRGETVKAFIVLKQGAAADEESLKRWCKERLAVYKVPKIFEFRESFPK
TMVGKVLRRRLIEEGQEPPGKDKDQGA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacttgtcaggccaaccttggattggacagtatcccgcatccgtaccgccgacc
tacgattatccgcatcatcatctggcgaagttcctggaggactccgccgcgaggcacggc
gaccatccggccctgtatttcatgggccgaacggtgacttaccggagcctgcttgagagc
gcccggcgcttcgctaacggtctgctcggcctcggggtccgcaagggggaccgcgtggcc
gtcatgctgccgaactgtccgcaggcagtgatcgcctactacggcacgctgctgatcggc
ggggtcgtcgtcatgacgaacccgctgtatatgccgcgggagctggagtaccagctgaac
gacgcggacgcgaagctgatcgtcaccctggacctgctctgcgagcgggtccagggggtg
atgccggccacggggctcggtcacctcgtggtgacgtccctggcggactatctgcctttt
ccgaagaacgtgctctatgggctgaagctccgcaaagacgggcagaaacccgatatcgtt
tacggggagcgcgtgctttctttttcgagactgctcaaaacgtcttctccggaggccgtg
gatgtgcaggtggatgccgggagcgatctcgcgctcattcaatataccggaggcacgacg
gggcgccccaagggggtcatgctcacgcatctgaatctcgtggccaatacgatccagagc
cgcctctgggcctaccggacgaaggaggcgcaggagaaatatttggcggccctgccgttc
ttccacgtgttcggcatgacggtgctcatgaaccagtccgtctatctggccggcacgctg
ctcctcatcccgcgcttccgggtcgaggacgtgctgaagacgattcataagtgcaggccc
acggtattccccggagctccgacgatgtacatctcgctgatcaaccacccggatatccgc
aggtacgatctctcgtcgatcgagttctgcatctccggcgcggccccgctgccccatgaa
gtgcaggagcggttcgagagcctgacgggtggcaagctcatcgaaggctacggcctcacg
gaagcctcgccggtgacccatgccaacaacatctgggaggccaggaagctcgggtcgatc
ggcatcccgttcccggataccgaggcgcgcatcgtcgatccgcagagcggggaggaggtg
ccgcaggggcagatcggcgagctggtcgtccgcgggccgcaggtgatggcgggttactgg
aagcggccggacgagacggcgaaggtgctgaaggacggctggctgtccaccggcgatatg
gcccggatggatgaggacggctatttcttcatcctcgaccggcgcaaggacctcatcatt
gcgggaggctataacatttatccgcgcgaggtcgaggaggtgctcttcgagcatccggac
gtggaggaggcggttgtcgccggtgtctccgatccgtaccggggtgagacggtcaaggcg
ttcatcgtgctgaagcagggggccgcggcggacgaggaaagcctgaagcgctggtgcaag
gagcggctggccgtctacaaggtcccgaagatcttcgagttccgcgagagcttcccgaag
acgatggtcggcaaggtgctgcgccgcaggctgattgaagaggggcaggagccgccgggc
aaggataaagatcagggggcctga
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