Paenibacillus mucilaginosus 3016: PM3016_594
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Entry
PM3016_594 CDS
T01757
Name
(GenBank) beta-lactamase domain-containing protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PM3016_594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmq03019
]
PM3016_594
Messenger RNA biogenesis [BR:
pmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PM3016_594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
RsbRD_N
HPTransfase
Motif
Other DBs
NCBI-ProteinID:
AFC27560
UniProt:
H6NT98
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All DBs
Position
703145..704953
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AA seq
602 aa
AA seq
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MDEISAKAQNAEERGTPKHNVKIIALGGLGEIGKNMYVIEYGEEIVVVDAGVKFPRSDLP
GVDYVIPNIEYLVQHQDKVKGIFLTHGHEDHIGGLPFILRELKVPVYGAPLTIGLVRAKL
EEHKLDKLVHLQVVKEETVIQLDKLRVHFFHTNHSIPDSLGVAVDTPEGIIVHTGDFKFD
MTPVGHRANIFKMSELGSQGVLALLADSTNSEKPGYTPSEKSVGAAVYDTFRTCEGRILF
ATFASNVHRLQQVVEAAEATGRKIAIQGRSMERVFRIAQELGYIRIPQGMQIDIQQLDKF
EDRRIVIICTGSQGEPNAALSRIASGAHSKVQIHPGDTVIFSSSPIPGNTQNINKNIDLL
FRAGANVIYGSVIDIHASGHGCQEDLKLMLSLIKPKYLVPIHGEYRMLLKHAQLAEELGI
TQDRSFVLDIGEVLHLNRRQARKGRKVPAGEMLVSGNKVGQVRSDILADRRHMSNNGVIL
VLMVVNEDWTAVLSGPELISRGFVFVKEASEIIQRATALTRRAVSRLIKQGVNTEEGWKS
RITEVLSSHLEKTMQRTPLIVPILTHLERQEKGPSRKPSRPRRKRATIAPAAAQEPTGTP
QK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatcagcgcaaaggctcaaaacgcagaagaacgcggaacaccgaaacataac
gtaaaaatcatcgctctcggcggtttgggcgaaatcggaaagaacatgtatgtcatcgag
tacggcgaagagattgttgtcgtggatgcgggagtcaaattcccaagaagcgacctgccc
ggtgtcgactatgtgattccgaatatcgagtatttggtgcagcatcaggataaggtgaag
ggaatcttcctgacgcacggccatgaggatcatatcggcggtctgccattcatcctcagg
gagctgaaggtgccggtctatggcgctcctcttaccatcggcttggtaagagccaagctt
gaagaacacaagctagacaagctggtgcatctgcaggtcgtgaaggaagagactgtgatc
cagctcgataagctgcgggtgcatttcttccacaccaaccacagtattcccgattcgctc
ggggtggctgtagatacaccggaaggtattattgtccatacgggggacttcaagttcgat
atgacaccggtagggcaccgggccaacatctttaagatgtcggagctcggcagccaagga
gttttggctctgctggcggacagcacgaacagtgagaagccgggctatacgccgtccgag
aaatccgtcggcgcggccgtgtatgacacattccggacgtgcgaaggccggatcttgttc
gcaacctttgcgtcgaacgtccacaggcttcagcaggttgtcgaagccgcggaagcaacc
ggccggaagattgctattcagggacggagcatggaacgcgtattccgcatcgcgcaggag
ctggggtatatccgcatccctcagggaatgcagatcgatatccagcagctggacaagttt
gaagaccgccgcatcgtcattatctgtacgggcagccagggtgagcctaatgcagccctg
tcccggattgccagcggtgctcattccaaggtgcagatccatccgggcgatacggtgatt
ttctcttcctcgccgattccggggaatacccagaacatcaataaaaatatcgatctcctg
ttccgtgcaggagcaaacgtgatttacggctcggtaatcgatatccacgcttccggtcac
ggctgccaagaggatctgaagctgatgctcagcctgatcaagccgaagtacctcgttccg
attcacggcgaataccggatgctgctcaagcatgcacagctggcagaagagctgggcata
acgcaggaccgttcgttcgtactcgatatcggggaagtcctgcacttgaaccgcagacaa
gcgcgtaagggccgcaaggtgcctgccggggagatgcttgtcagcgggaacaaagtaggt
caggtgcgcagcgatattctcgccgaccgccgccacatgtcgaacaacggggttatactg
gtgcttatggtcgtgaatgaggattggaccgcagtcctctcggggcccgagctcatctcc
cgcggcttcgtcttcgtgaaggaagccagcgagattatccagagagccacggcgctgacc
cgcagggccgtctcgcgtctcatcaagcagggcgtgaatacggaggaaggctggaaatcg
agaatcaccgaggtcctgtcgtcccacttggagaagacgatgcagcgcaccccgctgatc
gtgccgatcctcactcacctggagcgtcaggagaaggggccgagccgcaagccgtcccgt
ccaagaagaaagcgggccacgattgctccggctgccgcacaggagccgacaggaacgccg
cagaagtag
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