Paenibacillus mucilaginosus 3016: PM3016_5959 Help Entry PM3016_5959       CDS       T01757                                  Name (GenBank) PdhD   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism pmq  Paenibacillus mucilaginosus 3016 Pathway pmq00010   Glycolysis / Gluconeogenesis pmq00020   Citrate cycle (TCA cycle) pmq00260   Glycine, serine and threonine metabolism pmq00280   Valine, leucine and isoleucine degradation pmq00310   Lysine degradation pmq00380   Tryptophan metabolism pmq00620   Pyruvate metabolism pmq00630   Glyoxylate and dicarboxylate metabolism pmq00640   Propanoate metabolism pmq00670   One carbon pool by folate pmq00785   Lipoic acid metabolism pmq01100   Metabolic pathways pmq01110   Biosynthesis of secondary metabolites pmq01120   Microbial metabolism in diverse environments pmq01200   Carbon metabolism pmq01210   2-Oxocarboxylic acid metabolism pmq01240   Biosynthesis of cofactors Module pmq_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate pmq_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA pmq_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:pmq00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     PM3016_5959    00020 Citrate cycle (TCA cycle)     PM3016_5959    00620 Pyruvate metabolism     PM3016_5959    00630 Glyoxylate and dicarboxylate metabolism     PM3016_5959    00640 Propanoate metabolism     PM3016_5959   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     PM3016_5959    00280 Valine, leucine and isoleucine degradation     PM3016_5959    00310 Lysine degradation     PM3016_5959    00380 Tryptophan metabolism     PM3016_5959   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     PM3016_5959    00670 One carbon pool by folate     PM3016_5959  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmq04147]     PM3016_5959 Enzymes [BR:pmq01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      PM3016_5959 Exosome [BR:pmq04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    PM3016_5959 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA Pyr_redox_3 FAD_oxidored NAD_binding_8 FAD_binding_2 HI0933_like FAD_binding_3 UDPG_MGDP_dh_N DAO 3HCDH_N NAD_binding_7 Thi4 Lycopene_cycl AlaDh_PNT_C Trp_halogenase Motif Other DBs NCBI-ProteinID:  AFC32616 UniProt:  H6NPK4 LinkDB All DBs Position complement(7057505..7058920) Genome browser AA seq 471 aa AA seqDB search MVVGDASVEIDVLVIGAGPGGYVAAIRAAQLGKSVLVVDKAELGGVCLNRGCIPSKALIS AAHQYEVAKHGSSIGITADNVAVDFAKVQEWKNGIVKKQTGGVGMLLKGNKIQVFNGEAL FINEHEARVFNDNETARYKFNYCIIATGSRPIELKTFPFGGRILSSTEALQLSEIPKSMV VIGGGYIGIELGQTFAKFGTKVTVLEGSDHILPGFEKDLSSLVARNLKKLEVEVVTEAMA QGSEQSGDSVTVTYTVKGEEKKVTADYVLVTVGRRPNTDGDLSLELAGVEIGERGLIKVN EKGQTNVPHIYAIGDIVPGPALAHKASYEAKVAAESIAGLPSVVDYKVIPAVVFSDPEIA GVGLSESEAKAKGINTVVGKFPYGANGRAQSMNATDGFVKLIADKDTGVLVGGFVVGAEA SNLIAELTLGIEMGATLEDIALTIHAHPTLGEITMDAAEGALGHPIHQLGK NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt atggtagtaggtgacgcatcggtagaaattgacgttctcgtcattggtgccggtcctggc ggttacgttgcggccatccgtgccgcccagctgggcaagagcgtgctcgtagtggacaag gccgaactcggcggcgtctgcttgaaccgcggctgcattccatccaaggcgctaatcagc gcggcccatcagtatgaagtggccaagcacggctcctctatcgggatcacggctgataac gtagccgtggacttcgcaaaggtgcaggaatggaagaacggcatcgtgaagaagcagacc ggcggcgtaggcatgctgctgaagggcaacaagattcaggtattcaacggcgaggcgctg ttcatcaacgagcatgaagcccgcgtgttcaacgataacgaaacggcacgttacaagttc aactactgcatcatcgcgacgggctcccgtccgatcgagctcaagacgttcccgttcggc ggacgcatcctgtcctcgacggaagctctgcagctctccgagattccgaagagcatggtc gtcatcggcggcggctacatcggtatcgagcttggccagacgttcgcgaagttcggcacg aaggtgacggtgcttgaaggctccgaccacatcctgccaggctttgagaaggacctgtct tccctggttgcacgcaacctgaagaagcttgaggtggaagtagtaaccgaagcgatggcg cagggctccgagcagtccggcgactccgtaacggtaacgtacacggtcaaaggcgaagag aagaaagtaacggcggattatgtcctcgttacggtcggacgccgcccgaacaccgacggc gatctgtccctcgaacttgccggcgtcgaaatcggcgagcgcggcctgatcaaagtcaac gagaagggccagacgaacgtgcctcacatctacgcgatcggcgacatcgttccaggtccg gcactggcgcacaaagcttcctatgaagcgaaagtggcggcagagtcgatcgcgggactg ccaagcgtcgtagactacaaggtcatcccggccgtagtcttctccgatccggagattgcc ggcgtaggtctcagcgagagcgaagcgaaggccaaaggcatcaacacggttgtaggcaag ttcccttacggagccaacggccgtgcccagtcgatgaacgcgaccgatggctttgtgaag ctgatcgcggacaaagacaccggcgtactcgtcggcggattcgtcgtaggggcggaagcc tccaacctgattgcagagctgacgctcggcatcgagatgggcgctaccctcgaggatatc gctctgacgattcacgctcacccgaccctgggcgagatcacgatggacgccgccgaaggc gcgctcggccatccgattcaccagctcggcaagtaa

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