Paenibacillus mucilaginosus 3016: PM3016_6442
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Entry
PM3016_6442 CDS
T01757
Name
(GenBank) CobB
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00860
Porphyrin metabolism
pmq01100
Metabolic pathways
pmq01240
Biosynthesis of cofactors
Module
pmq_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PM3016_6442
Enzymes [BR:
pmq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
PM3016_6442
6.3.5.11 cobyrinate a,c-diamide synthase
PM3016_6442
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Gene cluster
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
AAA_19
NTPase_1
FTHFS
MobB
DUF1611
Zeta_toxin
LpxK
Motif
Other DBs
NCBI-ProteinID:
AFC33072
UniProt:
H6NGJ0
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Position
complement(7604187..7605614)
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AA seq
475 aa
AA seq
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MSDRKGRPGLIIAGTGSGAGKTTVTIGLMAALQRRGLRVQGFKCGPDYIDPTYHRAVTGR
ASRNLDSWMLSSEGVREIYQRAGADADISIIEGVMGFYDGKEATSNRGSTAEISLELGVP
VLLVVNCQSMARSCAAIVKGFQLLDPRVRIAAVFANKVGSEGHYRIVKDAVEAECGIPVI
GYMTRQEELALPERHLGLVPSIERGDLNAFFDLLADRMEANVGLDRLLELAAGSDPLPEE
EPRLFAPPAKTYPVKLAVAHDAAFHFYYPENLELLELHGAELAYFSPLGGEPLPEGAQGL
YLGGGFPEEFAERLSRQTDTAESIRRAVRQGLPTLAECGGYMYLTESITGTDGETHPMLG
LVPGRVTMQRKLAALGLREVKGAEGNFLFEGGLTARGHEFHYSAYELPESAAQLPPAYET
SGLRGTKPEGGLLYSVVAGYTHLHFGSQPKLVERWLQRCAAFEPAVPAQGEPSAG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcggaaggggcgcccgggcctcatcatcgccggcacgggcagcggagcaggc
aagacgaccgtgacgatcggcctgatggcggcgctgcagcgcaggggtctgcgcgtacag
ggcttcaagtgcgggccggattacatcgacccgacgtaccaccgggccgttacgggccgc
gcctcgcgtaacctggactcctggatgctctcctccgagggcgtccgggagatctaccaa
agggccggcgcggatgccgacatctcgatcatcgagggcgtcatgggcttctatgacggc
aaggaagcgacgtcgaaccggggcagcacggccgaaatctcgcttgagctcggcgtgccg
gtgctgctcgtcgtgaactgccagagcatggcgcgctcctgcgccgccatcgtgaagggt
ttccagctgctcgatccgcgggtgcggatcgccgccgtcttcgcgaacaaggtcggcagc
gaggggcattaccgcatcgtgaaggatgcggttgaagcggagtgcggcatcccggtcatc
ggctatatgacccggcaggaagagctcgcgctgccggagcggcatctcggcctcgtcccg
tcgatcgagcgcggcgatctgaacgcgttcttcgacctgctcgcggaccgcatggaggcg
aatgtggggctcgaccggctgcttgagctggccgccgggagcgatccgctgccggaggaa
gagccgcgcctctttgccccgcctgcgaagacgtaccccgtcaagctggccgtggcgcat
gacgccgcgttccacttctactaccccgagaacctcgagctgctcgagctgcacggggcg
gagctggcgtacttttcgcccctggggggcgagcccctgccggaaggagcccaagggctg
tatctcggcggcggcttcccggaggagttcgcggagcggctctcccggcagacggatacc
gcggagtcgatccgccgggccgtgaggcagggcctgccgacgctggcggagtgcggcggc
tacatgtatctcaccgagagcataaccggtacggatggggagacgcaccccatgctgggc
ctcgtgcccgggcgcgtcaccatgcagcgcaagctggccgccctgggtctgcgcgaggtg
aagggggccgaagggaacttcctgttcgaaggcgggctgaccgccagaggacacgagttc
cactactcggcctatgagcttccggagagcgcagcccagctgccgccggcctacgagacc
tcgggcctgcgggggacgaagccggagggcggcctgctctacagcgttgtagccggctac
acccatctccacttcggctcgcagccgaagctggtggagcgctggctgcagcgctgcgcc
gcttttgagccggcggtgccggcacagggagaaccgtctgcgggatag
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