Paenibacillus mucilaginosus 3016: PM3016_6725
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Entry
PM3016_6725 CDS
T01757
Name
(GenBank) GroL2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PM3016_6725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmq03019
]
PM3016_6725
03110 Chaperones and folding catalysts [BR:
pmq03110
]
PM3016_6725
03029 Mitochondrial biogenesis [BR:
pmq03029
]
PM3016_6725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmq04147
]
PM3016_6725
Enzymes [BR:
pmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PM3016_6725
Messenger RNA biogenesis [BR:
pmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PM3016_6725
Chaperones and folding catalysts [BR:
pmq03110
]
Heat shock proteins
HSP60 / Chaperonin
PM3016_6725
Mitochondrial biogenesis [BR:
pmq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PM3016_6725
Exosome [BR:
pmq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PM3016_6725
Exosomal proteins of other body fluids (saliva and urine)
PM3016_6725
Exosomal proteins of breast cancer cells
PM3016_6725
Exosomal proteins of colorectal cancer cells
PM3016_6725
Exosomal proteins of bladder cancer cells
PM3016_6725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFC33333
UniProt:
H6NNL2
LinkDB
All DBs
Position
complement(7922550..7924166)
Genome browser
AA seq
538 aa
AA seq
DB search
MAKHILFSEESRRAMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDPFENMGAKLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTSGANPMVVRKGID
KAVRVAVDQILSTAKTVEQKHEIAQVAAISAADDTVGELIAEAMEKVGKDGVITVEESKG
FQTELETVDGMQFDRGYISPYMITDSDKMEAVLDEPYVLITDKKISSLQDLLPVLEQVIK
QGKPLLIVAEDVEGEALATLVVNKLRGAFTCVAVKAPGFGDRRKAMLQDLAVLTGGQVIT
DELGLDLKGASLDQLGRARQIHVTKENTTVVDGYGSRPEIEARVQQIRNLIEETTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKEKKLRIEDALNATRAAVQEGIVAGGGVALIHA
IQAVEALTSEDSDEATGIRIVRHALEAPLRTIAANAGIDGSVVIERIKREPAGVGFNAAT
GEWVNMIESGIVDPAKVTRSALQHAASVASLFLTTECVVSDKPEPKKLGSGAGADMDM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcacatcctgttcagtgaagaatcccgccgggcgatgctccgcggtgtagat
acattggccaatgccgtgaaggtcacgctggggccgaagggccgcaatgtcgtattggag
aaaaaattcggctcgccgctcatcaccaatgacggcgtgacgatcgccaaggagatcgag
ctcgaagatcctttcgagaacatgggcgccaagctcgtcaaggaagtcgccacgaagacg
aacgatgtggccggtgacggcacgacgacagcgacggtgctagcccaggccatgatccgc
gaagggctcaagaatgtcacttccggagccaacccgatggtggtccgcaaggggatcgac
aaggcggtccgcgtggcggtcgaccagattctgagcacggccaagaccgtcgagcagaag
catgaaatcgcccaggttgcggcgatctcggcggcggatgacacggtcggcgaactcatc
gccgaagcgatggagaaggtcggcaaggacggcgtcattacggttgaggagtccaagggc
ttccagacggagctcgaaaccgtggacggcatgcagttcgaccgcgggtacatctcgccg
tatatgatcaccgactccgacaagatggaagccgtactggacgagccttacgtgctcatt
acggacaagaaaatctcgtccctgcaggacctgctgccggtgctcgagcaggtgatcaag
cagggcaagccgctgctgatcgtcgccgaggatgtcgaaggggaagcgctggcgaccctt
gtggtcaacaagctgcgcggcgccttcacctgcgtggcggtcaaggcgccgggcttcggc
gaccgccgcaaggcgatgctgcaggatctcgcagtcctgaccggcggccaggtgatcacg
gacgagctggggctcgacctgaagggcgcctcgcttgaccagctgggccgcgcccgccag
atccacgtcacgaaggagaacacgaccgtcgtcgatggctacggcagccgtccggagatt
gaggcacgcgtgcagcagatccgcaatctcatcgaggagacgacgtcggacttcgaccgc
gagaagctgcaggagcgtctggcgaagctggccggcggcgtggcggtcatcaaggtcggg
gcggcgacggagaccgagctcaaggagaaaaagctgcggatcgaagacgcgctgaacgct
acgcgggcggccgtgcaggaaggcatcgttgccggcggcggcgtagccttgatccatgcg
atccaggcggtcgaagcgctgacctccgaggacagcgacgaagcgaccgggatccgcatc
gtccgccatgcgctggaagcgccgctgcgcacgatcgccgcgaatgcgggcatcgacggc
tccgtcgtcatcgagcggatcaagcgtgagcctgccggcgtgggcttcaacgccgcgacc
ggcgagtgggtgaacatgatcgaatcgggcatcgtcgatccggcgaaggtcacccgttcg
gcgctgcagcatgccgcatccgtggcgtccctgttcctgacgaccgagtgcgtcgtcagt
gacaagccggagccgaagaagctcggcagcggagccggagcagatatggatatgtaa
DBGET
integrated database retrieval system
