Paenibacillus mucilaginosus 3016: PM3016_7098
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Entry
PM3016_7098 CDS
T01757
Name
(GenBank) RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmq
Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_7098
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PM3016_7098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
nSTAND_NTPase5
AAA_22
DnaB_C
AAA_16
AAA_24
nSTAND3
DUF7125
NTPase_1
AAA_14
GvpD_P-loop
KdpD
Rad51
SLFN-g3_helicase
NPHP3_N
ATPase_2
AAA_5
ABC_tran
AAA
NACHT
ArsA_ATPase
KTI12
DZR
HypA
DAP3
Motif
Other DBs
NCBI-ProteinID:
AFC33678
UniProt:
H6NSC8
LinkDB
All DBs
Position
complement(8317023..8318432)
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AA seq
469 aa
AA seq
DB search
MVNFVMELKGSDNSMAKTKTKFFCSECGYESPKWLGKCPGCQAWNSFVEEIETVSKSRGF
HGGASEKKEKAVSIINIESSEEARIITENRELNRVLGGGIVPGSLILVGGDPGIGKSTLL
LQTSYELTKQECKVLYISGEESVRQTKLRADRLQAISPLLFVLSETNAQFIEAAIDEIRP
DFVVIDSIQTVYHPAVESAPGSVSQVRECTGHFMRIAKGKGIATVLVGHVTKEGAIAGPR
MLEHMVDCVLYFEGERHHSYRLLRAVKNRFGSTNEIGIFEMQEIGLVEVSNPSELFLSER
PLGVSGSTVVAAMEGTRPVLVELQALVSQTNFPSPRRMATGYDHNRLSLIIAVLEKRMGM
FLQNQDAYLNIAGGVKLDEPAVDLAVAVSIASSFRDQPTQPFDVIIGEIGLTGEVRGVSR
VDQRVREAQKLGFKRIILPQKSLKGWTPPAGIEIIGVNTVAEALSAALV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtaaactttgtaatggaactgaaaggcagtgataacagcatggctaagaccaagacc
aagtttttctgttcggagtgcggatacgaatcacccaagtggctgggcaagtgtcccggc
tgccaggcatggaattcttttgtggaagaaatcgagacggtgtccaagagccggggcttc
catgggggagcttcggagaagaaagaaaaagccgtatcgatcataaacatagaaagcagc
gaagaagcccggatcattaccgagaaccgggagctcaaccgtgtgctcgggggcggcatc
gtaccgggatccctgatccttgtgggaggagacccggggatcggcaaatccacccttctg
ctgcagacttcttacgagctgaccaagcaggagtgcaaggtgctctatatctcgggtgaa
gaatcggtacgccagaccaagctgcgtgcggaccggctgcaggcgatttccccgctgctc
ttcgtcctgtcggagaccaacgcccagtttatcgaggcggcgatcgatgagatccgtccg
gatttcgtcgtcatcgactcgattcagacggtgtaccatcctgccgtggagtctgcgccg
ggaagcgtatctcaggtgcgggaatgtacggggcactttatgcggatcgccaaaggaaaa
ggtatagctacggtactcgttggccatgttaccaaagaaggggcgatcgcggggccgcgg
atgctcgagcatatggtggactgcgttctgtactttgagggggaacgccatcattcgtac
cggctgcttcgggcggtgaagaaccggttcgggtcgaccaacgagatcggaattttcgag
atgcaggaaatcggactcgtggaagtcagcaacccatccgagctgttcttgtcggagcgc
ccgcttggcgtatcaggttcgacggtagtcgccgccatggaaggcacgaggcccgtcctg
gtcgagctgcaggcactggtctcacagaccaatttcccgtcgccgcggcggatggctaca
ggctacgaccataaccggctttctttgatcatcgcggtgctggagaagcgcatgggcatg
ttcctgcagaaccaggatgcgtatctgaacatcgccggcggggtgaagctggatgagcct
gccgtcgatttggcggtagcggtgagtatcgcttccagcttccgtgaccagccgacccag
ccgtttgatgtcatcatcggtgagatcggcctaacgggtgaagtccgcggagtctcccgt
gtggatcagcgggtgcgtgaagcccagaagctcggattcaaacggatcatcctgccgcag
aagagcctcaagggatggacaccccctgcggggatcgagattattggcgtgaacaccgtg
gccgaagcgctttcggccgctttagtatag
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