KEGG   Paenibacillus mucilaginosus 3016: PM3016_7134
Entry
PM3016_7134       CDS       T01757                                 
Name
(GenBank) Hup2
  KO
K03530  DNA-binding protein HU-beta
Organism
pmq  Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:pmq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmq03032]
    PM3016_7134
   03036 Chromosome and associated proteins [BR:pmq03036]
    PM3016_7134
   03400 DNA repair and recombination proteins [BR:pmq03400]
    PM3016_7134
DNA replication proteins [BR:pmq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PM3016_7134
Chromosome and associated proteins [BR:pmq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PM3016_7134
DNA repair and recombination proteins [BR:pmq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PM3016_7134
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF4656 YidB HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AFC33711
UniProt: H6NSG1
LinkDB
Position
complement(8357606..8357878)
AA seq 90 aa
MNKTDLINNIAEKSGLTKKDVESVLNSFLGEISDALSRDDKVQLIGFGTFETRTRSGRTG
RNPQTGEEISIPESKVPAFKAGNKLKEAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagacttgatcaataacatcgcagaaaaaagcggcctgaccaaaaaggac
gtggaatccgtactgaacagcttccttggtgaaatctctgacgctttgtcccgcgacgac
aaagtccagttaatcggcttcggtactttcgaaacccgcacgcgctccggccgcaccggc
cgcaacccgcaaacgggcgaagagatctccattccggaatccaaagttcctgcattcaaa
gcaggcaacaagcttaaagaagcggtgaagtaa

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