Paenibacillus mucilaginosus 3016: PM3016_761
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Entry
PM3016_761 CDS
T01757
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00040
Pentose and glucuronate interconversions
pmq01100
Metabolic pathways
pmq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PM3016_761
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PM3016_761
Enzymes [BR:
pmq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PM3016_761
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
SusG_C
Motif
Other DBs
NCBI-ProteinID:
AFC27715
UniProt:
H6N8W9
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All DBs
Position
896926..898371
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AA seq
481 aa
AA seq
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MFKEWKVLLSCMLIGSLLPGGAAVAGSASTSKEAGADKKSLSPFVQTLPDGVTWAAYDSG
GLGVTGGNTAAQENVYVVHNLSELVQALGGDNAANGANGVPKLIFVQGTIDMNVDADNRP
LGLEAYAQLAYEEALLAEAAAPTGRTIVKYDEAAYVAAYDPAVYGRKAPAGPLEEARAAA
QKKQSANIKINVGSNTTIIGLGKDAKILGGNLVIKSDNVIVRNIEFQDAYDFFPQWDPTD
GSSGNWNSQYDSISIIGGTHVWIDHNTFNDGDRPDHTFPLYYGRKFQHHDGAVDITTDSK
VKKSSNYITVSYNHFAEHDKTSLIGSSDSATYDANNLRVTMHHNHFEGTDQRVPRVRFGQ
VHVYNNYYSESTLYAIGVGVSAQVVSEANVFESVSSPVAYYDKAALPGSVSDAGSLYLNS
GTPVLKGVPNWVPQKTYAYKLDPAQAVKAKVLAQAGAGRMAPGTEQLREQGQAAFAAARP
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaatggaaagtgctgctcagctgcatgctcatcggatcgcttctgcccggc
ggggccgccgtggcgggatccgcatctacatccaaggaggccggggctgacaaaaagagt
ttatcgccttttgtgcaaacgcttccggatggggtaacctgggctgcctatgatagcggc
gggctgggcgtaacgggcggcaatacggctgcgcaggagaacgtctatgtcgtccataac
ctcagtgagctggtgcaggcgctcggcggagataatgcggcgaacggtgccaacggggtg
ccgaagctgattttcgtgcaggggactatcgatatgaacgtcgatgcggataaccggcct
ctgggcctcgaagcgtatgctcagctggcctacgaagaagcgcttctggcggaggctgca
gccccaacgggcaggacgatcgtaaagtatgatgaagccgcttacgtggctgcctacgat
cctgcggtctacggcaggaaggcgccggccggtccgctggaagaagcaagggcggccgcg
cagaagaagcagtccgccaatatcaagatcaatgtcggctccaacactacgatcatcggc
ctcggcaaggatgcaaagattctcggaggcaacctggtgatcaagagcgacaatgtcatc
gtccgcaatatcgaattccaggatgcgtatgactttttcccgcagtgggaccctacggac
ggcagcagcggcaactggaattcccaatacgactcgatctccatcattggcggcacgcat
gtgtggatcgaccataacacgttcaacgacggggaccgtccggatcataccttcccgctg
tactacgggcggaagttccagcaccatgacggggcggtggatatcacgaccgactccaaa
gtgaagaaatcgtcgaactacatcaccgtctcctacaaccacttcgcggagcatgacaaa
acgtccctgatcggttccagcgactcggcgacctatgatgcgaacaacctgcgggtgacg
atgcatcacaaccacttcgaaggcacggaccagcgggttcctcgcgtgaggttcggccag
gtgcatgtctacaataattattacagcgagtccacgctgtatgccatcggggttggcgta
tcggcgcaggtcgtctccgaagccaacgtcttcgagtcggtaagctcgccggtcgcttat
tacgacaaggcggcgctgccgggcagtgtgagcgatgccggcagcctgtacctgaacagc
gggacgccggtgctgaagggcgtgccgaactgggtgccgcaaaagacctacgcgtataag
cttgatccggcgcaggccgtgaaggcgaaggtgctcgcacaggcgggagctggccggatg
gcgccgggcactgagcaactgcgtgagcaggggcaggctgcctttgcggcggcgaggcct
gcctag
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