Paenibacillus mucilaginosus 3016: PM3016_8
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Entry
PM3016_8 CDS
T01757
Name
(GenBank) GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmq03032
]
PM3016_8
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_8
Enzymes [BR:
pmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PM3016_8
DNA replication proteins [BR:
pmq03032
]
Prokaryotic type
DNA Topoisomerases
PM3016_8
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PM3016_8
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AFC27003
UniProt:
H6NSR3
LinkDB
All DBs
Position
6555..9062
Genome browser
AA seq
835 aa
AA seq
DB search
MSEEPRSQVKEIDIGSEMRTSFMDYAMSIIVSRALPDVRDGLKPVHRRILFAMSELGMSP
DKPYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSLRYMLVDGHGNFGSIDGDMAAA
MRYTEARLSKIAMELLRDINKETIDFVPNYDGEEQEPAVLPSRFPNLLVNGLSGIAVGMA
TNIPPHNLTEVINGVQQLIQNPEVTPLELMQSIKGPDFPTGGYIMGREGIKQAYATGRGS
VIMRAKTLIEENGNKARIIVYELPYQVNKARLIEKIAELVREKKIDGITDLRDESDRNGM
RIVIELRRDVNPNVVLNNLYKQTAMQSNFGIIMLALVNGEPKVLNLRDVLFHYLEHQKVV
IRRRTEFELRKAEARAHILEGLRIALDHLDEVIALIRASRTTEEAREGLMTRFGLSFDQA
QAILDMRLQRLTGLERQKIEEEYAELLKKIAEYKAILADEQLVLAIISEELNEIKEKFGD
ERRSEITIGEESIEDEDLIPQSDVVITITHTGYIKRLPVTTYRSQRRGGKGIMGMDTKDK
DFVEHLFVTNTHHYLLFFTNKGKVYRLKAYEIPDLSRTARGTPIINLIQIEQGETINAVI
PVESFDSDKYLFFASKKGLVKKTSLDDYSNIRKGGLIAITLREDDDLIGVRLTDGNQSII
MGTAQGMSIHFPENEVRPMGRSATGVKGIQLDEEDHVIDMDVVHEDNSVLIVTSKGFGKR
TPVSEYRLQSRGGKGIKTLNVTSKNGPVVGLKVVQEEEDLMIITAFGTVIRTSMSGISLM
GRNTQGVRLINIREEDEVSTLARVEKSDDPADDAEGEESEEIQGTSEGFDETSEE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaacctcgttcgcaagtaaaagaaattgatatcggttcggaaatgcgcacc
tcctttatggactatgcgatgagtatcatcgtctcccgtgcgctcccggatgtccgggac
ggcttgaagccggttcacagacggattctctttgccatgtccgagctcggcatgtccccg
gacaagccgtacaagaagtctgcgagaatcgtcggtgaagtaatcggtaagtatcaccct
cacggggattctgccgtgtatgagacgatggtccgtatggcacaggatttctcactgcgc
tacatgctcgtagacggtcacggaaacttcggttccattgacggcgatatggcggcggcc
atgcgttatacggaagcccgtctgtctaagattgccatggagctgctccgtgatatcaac
aaagaaacgatcgacttcgttccgaactatgacggtgaggaacaggagccggccgtactc
ccgtcccgtttccccaaccttctggtgaacggtctgtcggggatcgccgtcgggatggca
accaacattccgccgcataacctgacagaagtgatcaatggggttcagcagctgatccag
aacccggaggtcactccgctggagctcatgcagtcgatcaaggggccggacttccctacc
ggcggttatattatgggccgtgagggaatcaaacaggcgtatgcgaccggcagaggctcg
gtcattatgcgtgcgaagaccctgattgaggagaacggcaacaaagccagaatcatcgtt
tatgagctgccttaccaggtaaataaggcgcggttgatcgagaagatcgccgagcttgtg
cgtgagaagaaaatcgacgggattacggaccttcgggatgaatcggaccgcaacggcatg
cgcatcgtgatcgaactgcgcagagatgtcaatccgaatgtcgttttgaataatttgtac
aaacagaccgccatgcaatccaatttcggtattattatgctggctttggtcaatggcgaa
ccgaaggtgcttaatcttcgtgatgtgctgttccactacctggaacaccagaaggtagtc
atccgccgcagaaccgaattcgaactgcgcaaggcggaagcacgtgcccatattctggaa
ggcctgcgtatagcactcgatcatctggatgaagtgattgcgctcatccgtgcttcccgt
acgacggaagaggccagagaaggcctcatgacccggttcgggctcagcttcgatcaggca
caggccattctcgacatgcgtctgcagcgtctcaccgggttggagcggcagaagatcgag
gaagaatatgccgagcttctcaagaaaatcgccgagtacaaagccattctggctgacgag
cagctcgttctggcgattatcagtgaagagctcaatgagatcaaagagaagttcggagac
gaacggcgttccgaaattacgatcggtgaggaaagcatcgaagatgaggatctcattcct
cagagcgatgttgtcattaccatcacccataccggctatatcaagcgactgcctgtgacg
acataccgcagccagcgccgcggcggcaaagggattatggggatggacacgaaggataaa
gactttgtggaacacctctttgtcacgaacacgcaccactatctgctgttctttacgaac
aaaggtaaggtctaccgtttgaaggcttatgagattccggatctcagccgtacggccaga
ggaacgccgatcatcaacctgattcagattgaacagggggagacgatcaatgcggtcatt
ccggtggaatccttcgattcggacaagtatctcttctttgcatcgaagaagggacttgtg
aagaagacctcgctggacgattacagcaacattcgcaaaggcggtttgatcgcaatcacg
ctgcgcgaagacgatgacctgattggcgtgcgactaacggacggcaaccagtccatcatc
atggggacggcacaaggcatgtccatccacttcccggagaacgaagtgcgcccgatgggc
cgctcagctacgggggtcaaaggtattcagctcgatgaggaagaccatgtgatcgatatg
gacgtcgttcatgaagataacagcgtgctgatcgtaacttcgaagggcttcggcaagcgt
acgccggtatcggagtaccgtcttcagtcccgcggaggcaaagggatcaagaccctgaac
gtgacgtccaagaacggacctgtcgttggtctgaaggtcgtgcaggaagaagaagatctg
atgatcattaccgctttcggaacggtgatccggacgagcatgtcgggtatttctctgatg
ggccgcaacacccaaggggtaaggctcattaacatccgggaagaagatgaagtatctacc
ttggcccgggtggagaagagtgatgatccggcggatgacgcggaaggtgaggaatccgaa
gagattcaggggacctcggaaggctttgatgaaacgtcggaagaataa
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