Proteus mirabilis HI4320: PMI0620
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Entry
PMI0620 CDS
T00753
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmr
Proteus mirabilis HI4320
Pathway
pmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMI0620 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmr03019
]
PMI0620 (rhlE)
Enzymes [BR:
pmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PMI0620 (rhlE)
Messenger RNA biogenesis [BR:
pmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMI0620 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
HI1480
UvrD-helicase
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAR41470
UniProt:
B4ESW0
LinkDB
All DBs
Position
673134..674531
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AA seq
465 aa
AA seq
DB search
MTDFTSLGLSEALLRAIDEQGYKTPTPIQQQAIEPILAGKDVLASAQTGTGKTAAFTLPI
LEKLATSAEKTKGRKPVKALILTPTRELAAQIADNVKAYSRYLPIRSLVVFGGVSINPQM
MKLRGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSKEITGLANSLLNNPISIAVAPKNSAAESVDQYVHLVDKKRKTELLSHL
IGLENWPQVLIFTRTKHGANKLAEHLNLDGIKSAAIHGNKSQGARTRALADFKDGKLKAL
VATDIAARGLDIDQLPYVVNFELPQVAEDYVHRIGRTGRAAATGKAISLVCVDEHGLLAD
IERLLKREIPRLALEGYDPDPSIKAAPLHKKPKNKARNNKEGGHGRADIRGKDNRHTPRN
KNSRNQKESETGEIKQNKSKPARRSRKHDDDRDNQNPWSKARKEF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttacatcgcttggtttaagtgaggcgcttctccgcgctattgatgaacaa
gggtataaaaccccaacccctattcaacaacaggcgattgagccgattttggcgggtaag
gacgtattagcaagtgcacaaacgggtacgggaaaaacggccgcatttacattaccgata
ctggaaaaactcgctacatcagcagagaaaacgaaagggcgtaagccagttaaagcgctt
attttaacccctacacgtgaattagctgcacaaattgccgataacgtaaaagcttatagt
cgttatttacctattcgttcattggtggtttttggtggcgtcagtatcaatcctcaaatg
atgaaactacgaggtggcgtcgatgttttgattgcaacaccaggccgcttacttgatctt
gaacatcaaaatgctgtcgacttatctcgcgttgaagtattggtgttagatgaagctgat
cgtatgttagatatgggatttattcatgatattcgtcgagtcatcaataagttaccgaaa
aaacgacaaaatttactcttttcagcgactttttcaaaagagataacagggcttgctaac
tcactactcaacaatcctataagtattgctgttgcccccaaaaactcagcggctgaatct
gttgatcaatatgtccatttagtggataaaaagcgtaagacagagctgttatcacactta
attggcctagaaaattggcctcaagttcttatttttactcgaactaaacatggtgcgaat
aaattagctgaacatcttaatttagatggcatcaaatcagcggcgatccacggtaataaa
agccaaggagctagaacacgtgctctagctgattttaaagacggtaaattaaaagcgtta
gttgccactgatattgcagcgcggggacttgatattgaccaacttccttatgtggtcaac
tttgaattaccgcaggtagcagaagattatgttcatcgtattggtcgaacagggcgtgcg
gcggcaacaggtaaagcgatatctttagtttgtgttgatgaacatggcttattagccgat
attgaacgcttattaaaacgtgaaatccctcgtttagcattagaaggttacgatcctgat
ccctcaataaaagcggcgcctttgcataaaaagccaaagaataaagcacgtaataataaa
gaaggcggacatggtcgtgctgatattcgtggcaaagataatcgccatacaccacgtaat
aaaaatagtcgtaatcaaaaagagagtgaaacgggtgagataaaacagaataaatctaaa
ccagctagacgttcacgcaaacacgatgatgatcgtgataatcaaaatccttggtcaaaa
gctagaaaagaattttga
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