Proteus mirabilis HI4320: PMI2309
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Entry
PMI2309 CDS
T00753
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pmr
Proteus mirabilis HI4320
Pathway
pmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMI2309 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmr03400
]
PMI2309 (recB)
Enzymes [BR:
pmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PMI2309 (recB)
DNA repair and recombination proteins [BR:
pmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMI2309 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_12
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CAR44563
UniProt:
B4F2F7
LinkDB
All DBs
Position
complement(2511725..2515363)
Genome browser
AA seq
1212 aa
AA seq
DB search
MSEVIQAQVLDPYTLPLYQRRLIEASAGTGKTYTIGLLYLRLLLGLGGESAFHRPLSVEE
ILVVTFTEAATDELRARIRQNIHQLRLACIRHQVENDNNAYQILLDQIPNKMVAAQWLLE
AERQMDEAAIYTIHGFCQRMLATNAFESGVLFEQVLIQDEYELKKRVCADFWRRHCYPLS
YDVAYAVSEIWSGPEQLLYEIQPYLQGECPEIQGIDFDAKKETVEQRHQAVIEAIDKVKT
LWRHHCNEIADWITSSGVDKRSYSSRFLPKWIDEITAWATPLETKSYQLPDCLSRFSQAT
LHEKTTKGAAPEHALFAEIELLCQQSLTLRDVIIANAIPEIRQGIENEKMRRGELGFDDL
LTRLDKALQREGGEALADAIRQRYPVAMIDEFQDTDPQQYRIFDTIYGEHTESGLLFIGD
PKQAIYAFRGADIFTYIRARQQTDHHYTLNTNWRSAPGMVSAVNKLFLRSKTPFLFDHIP
FIEVNSAEKNQHMKFIYQQKTVAPLNFWLAEGESLSTGNYEQLMASQCAMQIRDWLSAGD
NQQAWLIEQDNKRAVTSADIVVLVRSRREALLIRDALDLLSIQSVFLSNRESVFETNEAK
DLLWLLQAVVTPEKERVLRASLASALFGFNAQQIDELNQDEQRWNRYVEQFSDYFVLWQK
RGVLPMLRKVMIENQIAENLLASQAGERRLTDIMHIGELLQETSLQLDSEHALIRWLAQQ
ISRPDAQAESQQMRLESDKNLVQICTIHKSKGLEYPIVCLPFACNYQEQKGALYHDRDEF
YAKLDIFNQPDSVRLADEERLAEDLRLLYVALTRAKFCCYVGVAPLVKGNKRKSGLTDLH
KNALGYLLQHGEEGNSELLHQSINQLLDDNIKVITLGDTSTHRYQSPHTTDIALDAAIFK
RKINDNWRITSYSGLTAQHSARGYLFDSADLDALVQSIAPGLDTDAKGEKTAQHSDELSI
HHFPRGAVAGTFLHSLLEELDFSQPIDESWMQEQLIAQGFEEKWTPLLVAWMETLFHTPL
NAQGLCLADIPKEHQLDELQFYLPIEKEMSAAQLTELTRQYDPLSAQCPALNFQQVQGML
KGFIDLVFCWEGKYYVVDYKSNWLGESSEDYTQEAMSNAMRDHRYDLQYQLYTLALHRFL
QQRLPDYDYQRHFGGICYLFLRGIDTDYPGNGVYTYLPEEKFVEALDALFKGEALEVNGS
KVNVLGENNSND
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagtgatacaggcacaggtattagatccctatacacttcctttgtatcaaaga
cgcctcattgaggcgtctgcgggaacagggaaaacgtacactatagggttattgtattta
cgattactgcttggattagggggcgagtcagcatttcatcgccccttaagtgttgaagag
atcttagtcgttacttttaccgaagcggcaacggatgaattacgcgcccgtattcgtcaa
aatattcatcagttaaggctagcctgtatccgtcatcaagtagaaaatgacaataacgct
taccaaatattattagatcaaatcccgaataaaatggtggcggcgcaatggctattagaa
gctgagcgtcaaatggatgaagccgccatttatactattcatggtttttgtcagcgcatg
ttagccactaacgcctttgaatctggtgtattgtttgaacaggtgttgatccaagatgag
tatgagttaaaaaaacgtgtttgcgctgatttttggcgcaggcactgttatcccctttct
tatgatgttgcctatgcggtaagcgaaatttggtctggccctgagcaactgctgtatgaa
attcaaccctatttacaaggtgaatgccccgaaattcaaggtattgatttcgacgctaaa
aaagagactgttgaacagcgtcatcaagcagtcattgaggctattgataaagttaaaaca
ctatggcgtcatcattgcaatgaaattgcagattggataacttcatctggtgttgataaa
cgcagttacagtagtcgtttcttacctaaatggatcgatgaaatcaccgcatgggccact
ccactcgaaactaaaagttatcagttacctgactgtttaagtcgtttttcgcaagcaacc
ctacatgaaaaaactacaaagggtgctgcgcctgagcacgctttatttgcggaaatcgaa
ctactttgccaacaaagtttaacgttacgtgatgtgatcattgctaatgccattcctgaa
atacgccaagggatagaaaatgaaaaaatgcgtcgtggtgagttgggatttgatgatctg
ttaacgcgtctcgataaggcattgcaacgagaaggtggcgaagcattagcagatgctatt
cgccaacgttatcctgttgcgatgattgacgaatttcaggataccgatcctcagcagtat
cgtatttttgatactatctatggtgagcatacagagagtggtttgctatttattggtgat
cccaaacaagccatttacgcatttcgtggtgcagatatctttacctatattcgggcacgg
caacaaaccgatcaccactatacattgaatactaactggcgctcggctccgggtatggta
agtgcagttaataaactgtttttacgttctaaaaccccttttttgtttgatcatattcct
tttattgaggtcaattcggctgaaaaaaatcagcatatgaagtttatttaccagcaaaaa
acggttgccccattaaatttttggttagctgaaggtgaaagcctttcaactggtaattat
gaacaattaatggcctcgcaatgtgcgatgcaaattcgtgactggttatcagctggtgac
aatcaacaagcttggttaatcgaacaagataataaaagagctgtcacatctgccgatatt
gtggtgctagtgcgtagtcgccgagaagcattattgatcagagatgcattagatctgtta
tctatccaatcagtatttttatccaatagagaaagtgtgtttgaaaccaatgaagccaaa
gatctactttggttactacaagcagtggtaacccctgaaaaagaacgggtgttaagagcg
tctcttgccagtgcactgtttggatttaacgcacaacaaattgacgaacttaatcaagat
gaacagcgttggaaccgctatgtggagcaattctctgattattttgtcttgtggcaaaaa
cgtggtgtgttacctatgctacgtaaagtcatgatagaaaaccaaatcgctgagaactta
ctcgcaagccaagcaggagaacgacgtttaaccgatatcatgcatattggcgagttgcta
caagaaacatcattacagcttgatagcgagcacgcccttattcgttggttagcccagcaa
atttctcgaccagatgcacaagcggaaagtcagcaaatgcgtttggaaagtgataaaaat
ctggtgcaaatttgtaccattcacaaatctaaaggattggaatatcccattgtttgccta
ccttttgcctgtaattatcaagaacaaaagggcgcgctttatcatgatagagatgaattt
tacgcaaaattagatatttttaatcaacctgatagcgtgcgtcttgctgatgaagagcga
ctggcagaggatttacgcttgttgtatgtggcattaactcgggcgaaattttgttgttat
gttggtgttgcgcctttggttaaaggaaataaacgtaagtcaggattaactgatttgcat
aaaaatgcgctgggatatctgttgcagcatggggaagagggtaatagtgagctattacat
caatccattaatcaattgcttgatgacaatataaaagtgatcacgttaggtgatacctca
acgcatcgatatcaatctccacatacaacggatattgctttagatgccgccatatttaag
cgaaaaattaatgataattggcgtatcaccagttattcgggattaacggcacaacactct
gctcgtggatatctatttgatagtgctgatttggatgccttggtacaatctatcgcaccg
ggcttagataccgatgctaaaggtgagaaaacagcgcaacacagcgatgaactctctatt
catcacttccctcgtggtgcagtcgcggggacatttttacatagtttgcttgaagagctt
gatttttcacagcctattgatgaaagttggatgcaagagcaacttattgcccaaggtttt
gaggaaaaatggacgccattgttggtggcttggatggaaaccctttttcacaccccatta
aatgcgcaaggcttatgtttagctgatattcctaaggagcatcaactcgatgagctacaa
ttctatctgcctattgaaaaggagatgtcggcggcacagttaacagaattaacccgtcaa
tacgatcctttatctgcgcaatgtccagccctcaattttcagcaagtgcaaggcatgcta
aaaggttttattgacttagtattttgttgggagggcaagtattatgtggttgactataaa
tctaactggcttggtgaatcgagtgaggattacacgcaagaggcgatgagcaatgcaatg
cgcgatcatcgttatgatttacagtatcaactctatactttagcgctacatcgattttta
caacaacgcttacctgattatgattaccaacgtcattttggtgggatctgctatctcttc
ttacgtggcattgatactgactacccgggcaatggcgtctatacctatctacctgaagaa
aagtttgtagaagcattagatgcgctatttaaaggggaagcgcttgaggttaacggcagt
aaagtgaacgtgctgggtgagaacaattcaaatgattaa
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