Proteus mirabilis HI4320: PMI3312
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Entry
PMI3312 CDS
T00753
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmr
Proteus mirabilis HI4320
Pathway
pmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMI3312 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmr03019
]
PMI3312 (rhlB)
Enzymes [BR:
pmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PMI3312 (rhlB)
Messenger RNA biogenesis [BR:
pmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMI3312 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAR46501
UniProt:
B4F1V3
LinkDB
All DBs
Position
complement(3631136..3632434)
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AA seq
432 aa
AA seq
DB search
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKT
LAFLTSTFHYLLTHPAKEGHEKNQPRALIMAPTRELAVQIYTDAQPLAQSTGVKMGLAYG
GDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLNAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPNAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSN
EEKMRLLQTLIEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILE
DFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGKSGNSISLA
CEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRRHRPRQGQPRRNNSAPRRGNNT
QRNNRNKRPSHS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacatatttgacagaaaagaagttttccgacttcgccttgcatccaaaagtg
atagaagcccttgagaaaaaagggttctctaattgtacacaaattcaggcattgacgtta
cctatcactgtgaaaggtcatgacattgctgggcaagcccaaacaggaacaggaaaaacg
ttggcgtttttaacctcgacgtttcattatcttttaactcaccctgcaaaagaagggcat
gaaaagaatcaacctcgtgcactgattatggcgccaacgcgcgaattagctgtgcaaatt
tatacagatgcacaacctttagcacaaagcactggtgttaaaatgggtctagcctatggt
ggagatggctatgacgaacaacttaaagtattaaataacggtgtagatatcgttatcggt
accacgggtcgtttaattgactatgtaaaacaaggtcacattaatcttaacgctattcaa
gttgtcgtacttgatgaagcagacagaatgtacgatctgggctttattaaagatattcgc
tggttattccgtcgcatgccaaatgccgcagagcgtatgaatatgctcttttccgccaca
ctctcatatcgtgtcagagagttagctttcgagcagatgaataaccctgaatatgtagaa
gttgaacctgaacaaaaaactgggtttagcataaaagaagagctgttctatccttctaat
gaagaaaaaatgcgtcttctgcaaaccttaattgaagaagagtggccagagcgctgtatt
atttttgctaacaccaaacatcgttgtgatgatatttgggcgcatcttgccgcagatgga
caccgcgtaggtctattaacaggtgacgtgccacagaaaaaacgtctgcgtatcctagaa
gattttacccaaggtaatattgatattcttgtggcaaccgatgttgcagctcgtggtctt
catataccttctgtaacacatgtctttaactatgatttacctgatgactgtgaagattat
gtacaccgtataggtagaactggacgtgcgggtaaaagtggtaactcaattagcttagcc
tgtgaagaatacgcgttgaatttaccggcgattgagacctatattcaacatgctattcct
gttagtaaatataacagtgatgcattattaactgatttacctgagccaaaacgtcgtcat
cgtcctcgtcaaggtcagcctcgtcgtaataattcggcacctcgtagaggaaataatact
caacgtaataaccgtaataaacgcccgagtcactcataa
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