Proteus mirabilis HI4320: PMI3424
Help
Entry
PMI3424 CDS
T00753
Symbol
deaD
Name
(GenBank) cold-shock DEAD box protein A (ATP-dependent RNA helicase)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmr
Proteus mirabilis HI4320
Pathway
pmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMI3424 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmr03019
]
PMI3424 (deaD)
03009 Ribosome biogenesis [BR:
pmr03009
]
PMI3424 (deaD)
Enzymes [BR:
pmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PMI3424 (deaD)
Messenger RNA biogenesis [BR:
pmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMI3424 (deaD)
Ribosome biogenesis [BR:
pmr03009
]
Prokaryotic type
rRNA helicases
PMI3424 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
CAR46715
UniProt:
B4F2C5
LinkDB
All DBs
Position
3753075..3754925
Genome browser
AA seq
616 aa
AA seq
DB search
MRHSDMTTETDMTFADLGLSAPILTALNDLGYEKPSPIQQQCIPFLLDGNDVLGMAQTGS
GKTAAFSLPLLHNLDESLKAPQILVLAPTRELAVQVAEAIEDFSKHLPKVNVVALYGGQR
YDVQLRALRQGPQVVVGTPGRLLDHLNRGTLDLSKLKGLVLDEADEMLRMGFIEDVENIL
SKIPAEHQTALFSATMPEAIRRITRRFMNDPKEVRIQSSVTTRPDISQSYWMTYGARKNE
ALIRFLEAEDFDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQSLREQTLERLKNG
RLDILIATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAILFVDNRER
RLLRNIERTMKMSIPEVELPNAELISQRRQEKFAQQIAQQLETSNLDQYRALLPKLAPQG
EEALDMETLAAVLLKMAQGERALILPPDPVRRPRREFNDRDDRRNDRERSPRRERRDAGE
MDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLYGSHSTIELPKGMPGDLLSHF
TRTRIMNKPLNMQLVGDAQPYRERRNSSRRDGQPQGGRRFSKGDQPPRRGNGERGNFRGR
GNNENAPRRRSSSHNQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacagtgacatgactactgaaaccgatatgacttttgctgatctaggtttatca
gcacctattttgactgcactgaatgatttaggctacgagaagccttctccaattcagcaa
caatgtattcctttccttttagatggcaatgatgttctaggtatggcacaaaccggtagt
ggtaaaaccgctgcgtttagcttaccgttattacacaatctagatgaatcattaaaagca
ccacaaattttagtgttagcaccaacccgtgaacttgcggttcaggttgccgaagccatt
gaagatttttctaaacatttaccaaaagtgaatgtcgttgctctgtatggcggccaacgc
tatgacgttcaactacgtgcattacgccaagggccacaagttgttgtgggtacaccgggt
cgtttattagatcacttaaaccgtggcaccttagatttatctaaactaaaaggtttagta
ttagatgaagctgatgaaatgttacgtatgggctttattgaagatgttgagaatatctta
agtaagatcccagcagagcaccagaccgcattattctctgcgacgatgccagaagctatc
cgtcgtattacacgtcgctttatgaatgatccaaaagaagtacgtattcaaagcagtgta
actacacgcccagatattagccaaagctattggatgacttatggtgcacgtaaaaatgaa
gcattaatccgtttcttagaagcagaagatttcgatgcagctattattttcgttcgtaca
aaaaatgcgaccttagaagtagcagaaaccttagagcgtaatggctataacagtgcggca
ttgaatggtgacatgaatcagtctctgcgtgagcaaacattagagcgtctgaaaaacggc
cgtttagatatccttatcgcaacggatgttgctgcgcgtggtctggatgttgaccgtatc
agcttggttgtcaactatgatatccctatggattcagagtcttatgtacaccgtattgga
cgtactggccgtgctggtcgtgcgggtcgtgcaattctatttgttgataatcgtgagcgc
cgtttactgcgcaatatcgagcgcacgatgaagatgtctattcctgaagttgaattacca
aacgcagagctgattagtcagcgtcgtcaggaaaaatttgctcagcaaatcgctcaacag
ttagaaacaagtaaccttgaccaatatcgtgcattgttaccaaaattagcgccacaaggt
gaagaagcgttagatatggaaacattggcggcggtattactgaaaatggctcaaggtgag
cgtgcacttattctgccacctgatccagtacgtcgtcctcgtcgtgaatttaacgatcgt
gacgatcgccgtaacgatcgcgaacgttctccacgtcgtgagcgccgtgatgcgggtgaa
atggatctttatcgtattgaagtgggtcgtgatgatggggttgaggttcgtcatattgtt
ggtgctattgccaacgaaggcgatatcagtagccgttatattggtaatatcaaattatat
ggctctcactcaaccattgagttaccaaaagggatgccaggcgatttattaagccacttc
actcgtactcgcattatgaataaaccattgaatatgcagttagtgggtgatgcacaacct
taccgtgagcgccgtaatagcagccgtcgtgatggtcagccacaaggtggtcgtcgcttt
agtaaaggcgatcaaccaccacgccgtggtaatggcgagcgtggtaacttccgtggtcgc
ggtaataacgaaaacgcaccacgtcgccgtagtagctctcataatcaataa
DBGET
integrated database retrieval system
