Proteus mirabilis HI4320: PMI3550
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Entry
PMI3550 CDS
T00753
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmr
Proteus mirabilis HI4320
Pathway
pmr00071
Fatty acid degradation
pmr00280
Valine, leucine and isoleucine degradation
pmr00310
Lysine degradation
pmr00362
Benzoate degradation
pmr00380
Tryptophan metabolism
pmr00410
beta-Alanine metabolism
pmr00640
Propanoate metabolism
pmr00650
Butanoate metabolism
pmr00907
Pinene, camphor and geraniol degradation
pmr00930
Caprolactam degradation
pmr01100
Metabolic pathways
pmr01110
Biosynthesis of secondary metabolites
pmr01120
Microbial metabolism in diverse environments
pmr01200
Carbon metabolism
pmr01212
Fatty acid metabolism
Module
pmr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PMI3550 (fadB)
00650 Butanoate metabolism
PMI3550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PMI3550 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PMI3550 (fadB)
00310 Lysine degradation
PMI3550 (fadB)
00380 Tryptophan metabolism
PMI3550 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PMI3550 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PMI3550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PMI3550 (fadB)
00930 Caprolactam degradation
PMI3550 (fadB)
Enzymes [BR:
pmr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PMI3550 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PMI3550 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PMI3550 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PMI3550 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
CAR46955
UniProt:
B4EWE2
LinkDB
All DBs
Position
complement(3869984..3872164)
Genome browser
AA seq
726 aa
AA seq
DB search
MLYQSENIQADWVKQGIVELVFNASGSINKLDTKTVAMLSEALTVLENTSDLKGVILRSE
KPAFIVGADITEFLSLFDAPVEELTQWLHFANHIFNRLEDLPVPTVSAINGYALGGGCEC
VLATDFRIASPDLRIGLPETKLGIMPGFGGSVRLPRLIGVDNALEIITAGKDINAETALK
NGLIQAIVPVDKLKKSAISLIEQAIDGKFDWQAARQPKTVALRLTELEHKMSFAVAKGMV
MKVAGPHYPAPMTAVNTIEKAAFLDRKAALELETENFVKLTRTDVAKALVGIFLNDQYVK
GITKKRHASLPKQAAVLGAGIMGGGIAYQSALKGIPVTMKDINANSLELGMTEALSLLQK
RQEKGRMSAVDMAKTLASIHPTLNYASVADAQIVVEAVVENPKVKASVLAETEALLADHA
VLASNTSTIPISLLAKSLTRPENFCGMHFFNPVHRMPLVEIIKGEKTSEETINRIVSYAS
KMGKTPIIVNDCPGFFVNRVLFPYFAGFSLLLRDGADFIAVDKVMEKAFGWPMGPAYLLD
VVGIDTANHAQAVMAQGFPDRMGSIDKDVIALLYQQQRYGQKNNHGFYDYTIDKRGKKQK
QVDNDIHSLIEHHVGKKQEFNQDTIIARMMIPMINEVIRCLDEGIIASPAEADIALVYGL
GFPPFRGGVFRYLDTIGLAQFVANAEQYSELGPLYQIPESLKQKALRNETYYPKPAKVDV
NIRELA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaagcgaaaatattcaagccgattgggtgaagcaaggtattgttgagctc
gttttcaatgctagcggttctattaataaattagatacaaaaacggtggcaatgttaagc
gaagcgttaacagtattagaaaatacatctgatctaaaaggggttattttacgttcagaa
aaacccgcctttattgttggtgccgatattaccgaatttttatcactttttgatgcaccc
gttgaagaactgacacaatggctacattttgctaatcatattttcaatcgattagaagat
ctccccgttcctacagtttctgccattaatggctacgccctaggcggtggctgtgaatgt
gtattagcaacggattttcgtattgcatcaccggatttacgcattggtttacccgaaaca
aaacttggtattatgccgggttttggtggctctgttcggctacctcgccttattggcgtt
gataatgccttagaaattattaccgcaggtaaagatattaatgccgaaacagcacttaag
aatggcttaattcaagctattgtccctgttgataagctaaaaaaaagtgccatttcactg
atagagcaagccattgatggcaaatttgactggcaagctgctcgtcaacctaaaactgtg
gcattaagattaacggaacttgaacataaaatgtcatttgctgtggcaaaaggcatggtg
atgaaagtcgcaggccctcattatccagccccaatgaccgccgttaatacgatagaaaaa
gccgcatttctagatagaaaagcggcacttgaattggaaacagaaaactttgtcaaactg
acccgcaccgatgttgccaaagcattagtgggtattttccttaatgatcaatatgtgaaa
ggcattactaaaaaacgtcatgctagcttaccaaaacaagcggcagtattaggcgcgggg
atcatgggtggcggaattgcctatcaatctgcactaaaaggcattcctgttaccatgaaa
gatattaatgccaactcccttgaattgggtatgacagaagcactcagcctgttacaaaaa
cgtcaagaaaaaggacgtatgagtgccgttgatatggcaaaaaccctcgcctctattcat
cctaccctaaactatgccagtgtagctgatgcacaaattgtggtcgaagcggtggttgaa
aaccctaaagtaaaagcctctgtacttgctgaaaccgaagcgctccttgctgatcatgct
gtacttgcttcgaatacctcaacaatccccatttcgctacttgccaaatcactaacacgc
cctgaaaatttctgtggaatgcacttctttaatcccgttcaccgcatgcctttagttgag
atcattaaaggtgaaaaaaccagcgaagagacgattaatcgcattgtcagttatgctagc
aaaatgggtaaaacgccaatcattgttaatgactgcccggggttctttgtcaatcgcgtg
ctcttcccttatttcgccggattttctcttttattaagagatggtgctgattttattgct
gtagataaagtgatggaaaaagcctttggctggccaatgggtccggcttatttactggat
gttgtcggtatcgatacagcgaatcatgctcaagcagtgatggctcaaggtttcccagac
agaatgggcagtattgataaagacgttattgcgcttttatatcaacaacaacgctatggt
cagaaaaataatcatgggttctatgactacactattgataagcgtggtaaaaaacaaaag
caggtagataacgatattcacagccttattgaacatcatgtcggcaaaaaacaggaattt
aaccaagacactattattgctcgtatgatgatcccaatgatcaatgaagttattcgctgc
ttagatgaaggcattatcgcctcacctgcagaagccgatattgcattagtgtatggttta
ggcttccctcctttccgtggtggtgtcttccgttacctcgataccattggattagcacaa
tttgttgcaaatgcagagcaatactcagagttagggccactttaccaaattcctgagagc
ttaaaacaaaaagcattacgtaacgaaacctactatccaaagcctgcaaaagtagatgtt
aacatcagagaactcgcttaa
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