Proteus mirabilis HI4320: PMI3635
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Entry
PMI3635 CDS
T00753
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pmr
Proteus mirabilis HI4320
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmr03019
]
PMI3635 (cafA)
03009 Ribosome biogenesis [BR:
pmr03009
]
PMI3635 (cafA)
Messenger RNA biogenesis [BR:
pmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PMI3635 (cafA)
Ribosome biogenesis [BR:
pmr03009
]
Prokaryotic type
rRNA processing factors
PMI3635 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF6305
Motif
Other DBs
NCBI-ProteinID:
CAR47101
UniProt:
B4EX34
LinkDB
All DBs
Position
3971790..3973259
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AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYISGGILQEIHVEREAKRGLVGNIYKGRVSRVLPGMQAAFIDI
GLEKAAFLHASDIMPHTECIAGEEQKKFNVRDIAQLVHQGQDLIVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEEERERLKRLVEEYCDENGGFIIRTAAEGVGEH
EIKQDAAFLKRLWNKIIERKKRNKTRIQIYGELALAQRILRDFAGAELDSIRVDSKLTYH
QLQEFIGEYIPELTAKLELHQGNQPIFDLYGVESEIQRALERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLEETIFNTNVEASQAIARQLRLRNLGGIIIIDFIDMSNEDHRRRV
LASLEQALSKDRVKTTINGFSQLGLVEMTRKRTRESLEHVLCDDCPTCQGRGTVKSVETV
CYEILREIVRVHKTIDADRFLVYAAPAVVEALKGDESHALAEVEIFVGKQVKVQTELLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagctattagtgaatgtgactccctctgaaacccgagtggcctatatcagc
gggggcatactacaagagatccacgttgaaagagaagccaaacgaggtcttgtcggaaac
atctacaaaggtcgggtaagtcgtgtattacctgggatgcaagctgcatttattgacatt
gggcttgagaaagccgcttttttacatgcttctgatattatgcctcacacggaatgtatc
gcgggtgaagagcagaaaaaatttaatgttcgtgatattgcgcaacttgtacatcaaggt
caggacttgattgtacaagtggtgaaagatcctctaggtacaaaaggggcacgtcttaca
acagatatcacattaccatcacgttacttggtgtttatgccgggggcttctcatgtgggt
gtttcacaacgtattgaaagtgaagaagaacgtgagcgcttaaaacgcttggtagaagag
tattgtgatgaaaatggcgggtttattattcgcactgccgctgaaggtgtcggcgaacat
gaaataaaacaagatgctgcttttttaaagcgcctatggaataaaatcattgagcgtaaa
aaaagaaataaaacgcgtattcaaatttatggtgagctcgctttagcacaacgtatttta
cgtgattttgcaggggctgaattagatagcattcgggttgactctaaattaacttatcat
caattacaggagtttattggtgaatatattcctgaattaaccgctaaacttgaattacac
caaggtaatcaacctattttcgatctctacggggttgaaagtgaaattcagcgcgcgtta
gagcgaaaggtcgagttaaaatcaggaggctatctgattatcgaccaaaccgaagcaatg
acaacgattgatatcaatacgggcgcttttgttggtcatcgtaatttagaagagacgatt
tttaataccaatgttgaggcgagtcaggcgatagcgcggcaactgagattacgtaattta
ggcggcattatcattattgattttattgatatgagtaatgaagatcatcgccgtagagta
ttagcttccttagaacaagcattgagcaaagatcgcgtgaaaacgaccatcaatggtttt
tcacaattaggtttggttgagatgacacgtaaacgaacccgtgaaagtctcgagcatgta
ctttgtgatgactgtcctacttgccaaggccgtggtacagtaaaatcagttgaaacggta
tgttatgaaatattacgagaaattgttcgtgttcataaaaccatagacgcagatcgcttt
ttggtttatgccgcccccgctgttgtggaagcactaaaaggtgatgaatcacatgcttta
gccgaagtggaaatttttgttgggaagcaagtcaaagtgcaaactgagctactctatagt
caggagcagtttgatgtggtgatgatgtaa
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