Petromyzon marinus (sea lamprey): 103091677
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Entry
103091677 CDS
T09614
Name
(RefSeq) biglycan
KO
K08118
biglycan
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103091677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmrn00535
]
103091677
Proteoglycans [BR:
pmrn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
103091677
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
103091677
NCBI-ProteinID:
XP_032822259
UniProt:
A0AAJ7X6W2
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Position
36:complement(957743..973246)
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AA seq
427 aa
AA seq
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MVAARAGPAWLLTAAFLLTLAATAALSTGAGRRQQQQRWSSPAVPRRPRQPQFFLDFAAA
DEALELSGDGTDSGYLPGGSGYPGIRPPVAPKPPAAPKPPAAPKPPTSPVAPPQPPSVGC
PFGCQCSLRVVQCSDLGLKSVPAGIPKDARMVDLQSNKITEIKQDDFKGLAQLHALFLVN
NLIAKIHPKAFAPMVSLDKLYISHNRLTEVPTGLPPSLIELRVHENLIKRVPKDTFINNG
QLHVIELGKNPLPSSGIEVGAFNGLDKLTYIRISYSKLTQLPKELPNSLLELHLEGNEIV
AIEDEDLFGYPYLFRLGLSYNKITEVQNGSLAVSGNLRELHLDNNLLVSVPPGLSKLRSL
NVVYLHSNKIKEVKPTDFCPTVFSPKRAQYAGISLYDNPVKYWEVPPSVFRCVHNHNAIH
FGSNYRK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagcgcgagcgggccccgcgtggctgttgacggccgcgttcctcctcaccctc
gcggccacggcggccttgagcaccggcgcggggcggcggcagcagcagcagcgctggagc
agcccggcggtgccgcgccggccgcgccaaccgcaattctttctggatttcgcggcggcg
gatgaggccctggaactctctggggatggcacagactcggggtatttgcccgggggctcg
ggctaccccgggatacgtccgccggtggcgcccaaaccaccggcggcgcccaaaccaccg
gcggcgcccaaaccaccgacctcccccgtggcgccccctcagcccccctccgtggggtgc
cccttcggttgccagtgcagcctgcgtgtggtgcagtgctccgatcttggcctcaagtcg
gtgccggccggcatcccgaaggacgcgcggatggtcgacctccagagcaacaagatcaca
gagatcaagcaagacgacttcaagggcctggcccagctgcacgcgctgttcctggtgaac
aacctcatagcgaagatacaccccaaggcgtttgcgcccatggtgagcctggacaagctc
tacatctcccacaaccgcctcacggaggtccccacggggctaccgccctcgctcatcgag
ctgcgggtccacgagaacttaatcaagcgcgtgcccaaagacacgttcatcaacaatggg
cagctccacgtcatcgagctgggcaagaacccgctaccaagctcgggcatcgaggtgggc
gccttcaacggcctggacaagctcacctacatccgcatctcctactccaagctcacgcag
ctgcccaaggagctgccaaactccctgctggagctgcacctggagggaaatgagatcgtt
gccattgaggatgaagacctcttcgggtacccgtacctcttccgactgggcttgagctac
aacaagatcacagaggtgcagaatggcagcctcgccgtgagcggcaacctgcgcgagctt
cacctggataacaacctcctggtcagcgtgccgccgggcctgtccaagctccgcagcctc
aacgtggtctacctgcacagcaacaagatcaaggaggtgaagcccaccgacttctgccca
acggtgttcagccccaagcgcgcccagtatgccggcatctcgctctacgacaaccccgtc
aagtactgggaggtcccacccagcgtcttccgctgcgtccacaaccacaacgcaatccac
tttggcagcaactaccgcaaatag
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