Petromyzon marinus (sea lamprey): 103091741
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Entry
103091741 CDS
T09614
Name
(RefSeq) biglycan
KO
K08118
biglycan
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103091741
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmrn00535
]
103091741
Proteoglycans [BR:
pmrn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
103091741
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRR_9
LRR_14
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
103091741
NCBI-ProteinID:
XP_032825676
UniProt:
Q9DDZ7
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Position
42:11104743..11124171
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AA seq
410 aa
AA seq
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MASLCVCALLLVCALSSPSISSSVATATSSKPFAQRQFFTDFMMADDAVEFSGDDSVAPS
ATPKKVGGDRSKATAGKQPGRGAATPPKSLPPPPPPPPPDASCPFGCQCSARVVQCSDLG
LVSVPQAIPKDARLLDLQNNKITEIKQDDFKGLNKLYALYLVNNLISKVHPKAFAPLSSL
DKLYISHNQLTEVPGSMPSSLVELRIHENNIKKIPKDAFSGMKRLHALEMGGNPLQSTGI
EVGAFEGLERLVYVRVSDSKLARIPKDLPNSIQELHLEHNQITALEQEDLIRYPLIHRLG
LSYNQIKVIQNGSLETCPHLRELHLDSNVLTQVPPGLAFLKHLQVVYLHSNKIAAVKSDD
FCSKGASPKRVLYSGISLFDNPVNYWDVPPSAFRCVASRSAVQFSQNFRK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgtgcgtgtgcgctttgctcctcgtctgcgccctctcctccccctccatc
tcctcctcggtggccacggccacctcctccaaaccgttcgcccagcgccagttcttcacc
gacttcatgatggccgacgacgccgtggagttctcgggagacgactccgtggcccccagc
gccacgcccaagaaggtcggaggggaccgctccaaagcgaccgccgggaagcagccgggc
cgcggggccgccaccccgccaaagtcgctgccgccgccgcctccgccgccgcctcccgac
gcgagctgcccgtttgggtgccagtgcagtgcgcgggtcgtgcagtgctcagacctgggc
ctcgtctccgtgccccaggccatccccaaagacgcccgcctcctcgatctgcagaacaac
aagatcacggagatcaagcaggacgacttcaagggcctcaataaactatatgcgctgtac
ctggtgaacaacctcatcagcaaggtgcaccccaaggcgttcgcaccgctctcgagcctg
gacaagctgtacatctcgcacaaccagctgaccgaggtgcccggctccatgccgtcctcc
ctggtggagctccgcatccatgaaaacaacatcaagaagatccccaaggacgcgttctct
ggcatgaagagactccacgcgctcgagatgggagggaaccccctgcagtcgacagggatc
gaggtgggggccttcgagggactggagcgcctcgtgtacgtgcgcgtgtccgactcgaag
ctcgcgcgcatccccaaagatctgcccaactcgatccaggagctgcacttggagcacaac
cagatcacagctctggagcaagaggatctgatccgatacccgctcattcaccggttgggc
ttgagctataaccagatcaaggtgattcagaacggaagcctggagacctgcccacacctg
agggagctgcacctggacagcaacgtcctaacgcaggtgccccctggcctggccttcctc
aagcacctgcaggtggtctacctgcacagcaacaagatcgcggccgttaaatcggacgac
ttctgcagcaagggcgcgagtcccaagcgagtcctttactcgggcatctccctgttcgac
aaccccgtcaactactgggacgtgccgccctctgccttccgctgcgtggccagccgctca
gccgtgcagttcagccagaatttccgcaaatag
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