Petromyzon marinus (sea lamprey): 103091801
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Entry
103091801 CDS
T09614
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
103091801
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103091801
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
YVC1_C
DLP_helical
Motif
Other DBs
NCBI-GeneID:
103091801
NCBI-ProteinID:
XP_032833606
UniProt:
A0AAJ7UBW5
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Position
64:complement(4674509..4688082)
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AA seq
1046 aa
AA seq
DB search
MLMLLLLPLAPPTPVSPEQHARSWRNIVSRKVRFPIALQAAIRDGNVARVYDILGAAETG
GGVTAERGGAPNPRQADEQEDRSWREALNLAIRMGSDEVLGALLRCVRFDFRQIHEALLV
AVDTNQQQVVTLLLDRLDNDKALGHNKMDIRSFSLAIFDHSMDSSRYPPGVTPLTLASQD
NLFDIVEVLLKKGHAIQRPHNISCGCLECQNGRQYDTLKFSLSRINTYRGLAGRPYLCLA
SGDAILGAFELSRELTRLARQEPEFKAEYMELDRQCEEFAVELLAMCQNQREVDSLLNDA
PPHGDEELAHGAFEEGIPSLGRLRLAVSHHQKLFVSHPVCQQVLTSIWCSGMPSWRGSHA
AVKAGTCLGIFLGMPVLALIYWIAPKSRLGNLLRTPLLKFLMHSASYLWFLFFLLVESIM
MDSSSDIVSTRNQTLMDNSFHMVWVAGFLWYECKEVWIEGLCVYLSDWWNCLDLAMISMY
ISSFTLRLLVRWSGELACGRDPLSAECAYFTTAERGQWQKDDPQIIAEVVFAITSALSFT
RLAFILPAHESLGTLQISIGKILGDIFRFMFLVMIIGTAFLCGINNLYVHYTFNKLGRFN
ETFQYLFWTVFGMEDRRTTDIPNFEIAQFVGRSLYGVYAIIMAIVLLNMLIAMITSSFER
IEDDADVEWKFARSRLYLSYFREGLTLPVPFNLIPSPKSVYYAIMRTAGLLFCRTSQGPS
SPSVPSISEVIMNTGVHDGWGLVEPRGARQSQVIRTLVRRYIDKARQEYEENKHKDLGFR
VGELTKSVARMHGDIKSIRRSLSRARLGLPEFAVSPGQARSDGDTASYLHATSDGESPCS
SASASQRGSFRFVVHEPDSPAQHRSGPAHDDAQHPRPVQRGGDSQRLGPVHTPRALPSQQ
LGSRSPVSDCLRIGASDGHGASEVPGAPRVGGVDLGGGPSAVGNRPTSVAERATPNAADD
AHGLERKPSLFDGRSGGRKGSGDDTAVAPVEGGGGGGDDEANAHCTHASTARPDAAAGGT
VGGNMGVATGVGRIRGAEESDDYTAL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgctgctgctgctaccgcttgcgccaccgacccccgtgtcgccggagcagcac
gcccgcagctggcgcaacatcgtgagcaggaaggtgcgcttccccatcgccctgcaagcg
gccatccgcgacggtaacgtggcgcgcgtctacgacatcctgggggccgccgagaccgga
ggtggggtcacggcggagcgggggggggcacccaacccgcggcaggcggacgagcaggag
gatcgctcgtggagggaggcgctgaacctagcgatccgcatgggcagcgacgaggtgctg
ggcgctctgctgcgctgcgtgcgcttcgacttccggcagatccacgaggccctcctcgtc
gccgtggacaccaaccagcagcaggtcgtgacactgctcctcgaccgcctggacaacgac
aaggccctgggccacaacaagatggacatccgctccttctcgctcgccatcttcgaccac
tcgatggacagctcgcgctaccctccgggcgtcacgccgctcacgctcgcctcgcaggac
aacctcttcgacatcgtcgaggtgctgctgaagaaggggcacgccatccagcgaccgcac
aacatctcctgcggctgcctcgagtgccagaacgggcggcagtacgacacgctcaagttc
tcgctgtcgcgcatcaacacgtatcgcggcctcgccgggcggccctacctgtgcctcgcg
agcggcgacgccatcctcggcgccttcgagctgagccgggagctcacgcgtctcgccaga
caggagcccgagttcaaggcggagtacatggagctggaccggcagtgcgaggagttcgcc
gtggagctgctcgcaatgtgccagaaccagcgcgaggtggactcgctgctcaacgacgcg
cctccgcacggcgacgaggagctggcgcacggcgccttcgaggagggcatccccagcctg
ggccgcctgcggctcgccgtgtcgcaccaccagaagctgttcgtctcgcacccggtgtgc
cagcaagtcctcacctccatctggtgctcgggcatgcccagctggaggggcagtcacgcc
gcagtcaaggcgggcacctgcctgggcatcttcctgggcatgccggtgctcgccctcatt
tactggatcgcgcccaagtccaggttggggaacctgctgcgaacgcccctgctcaagttt
ctcatgcactcggcctcctacctgtggttcctcttcttcctgctcgtcgagtccatcatg
atggacagctccagcgacatcgtgtccacacgcaaccagacgctcatggacaactccttc
cacatggtttgggtggcaggcttcctgtggtacgagtgcaaggaggtgtggatcgagggc
ctgtgcgtgtacctgtcggactggtggaactgtctggacctggccatgatcagcatgtac
atctcctccttcacgctgcgcctgctcgtgcgctggagcggagagctggcgtgcggccgg
gacccgctctcggccgagtgtgcgtacttcaccacggccgagcgcgggcagtggcaaaaa
gacgacccccagatcatcgccgaggtggtgttcgccatcacgagcgcgctcagcttcacg
cgcctcgccttcatcctccccgcgcacgagtcgctcggcacgctgcagatctccatcggc
aagatcctcggggatatcttccggttcatgttcctggtgatgatcatcggcacggcgttc
ctgtgcggcatcaacaacctctacgtgcactacacgttcaacaagctgggccggttcaac
gagacgttccagtacctcttctggacggtgttcggcatggaggaccggcgcaccacggac
atccccaacttcgagatcgcgcagttcgtggggcgcagcctctacggcgtctacgccatc
atcatggccatcgtgctgctcaacatgctaatcgccatgatcaccagctccttcgagagg
atcgaggacgatgcggacgtggagtggaagtttgcgcgctcgcgcctctacctctcctac
ttccgagagggcctcaccctgccggtgcccttcaacctcatccccagccccaagtctgtc
tactacgctatcatgcgaacggccgggctcttgttttgccggacgtcgcaggggccatcc
tcaccatctgtgccaagcatcagcgaagtcatcatgaacacaggtgtccacgacggctgg
ggcctggtggaacccaggggcgctcggcagagccaggtgatcaggacgctggttcggcgc
tacatcgacaaggcccggcaggagtacgaggagaacaagcacaaagatctgggcttcagg
gtcggggagctcacgaagtcggtggcgcggatgcacggcgacatcaagtcgatccgcagg
agcctgagccgggcccggctaggcctgcccgagttcgcggtgtcgcccgggcaggcgcgg
agcgacggcgacaccgcctcttacctgcacgcgacctccgacggcgagtcgccctgctcc
agcgccagcgcatcgcaacgcggctctttccgcttcgtcgtccacgagccggactctccg
gcccagcatcgctcggggcctgcgcacgacgacgcccagcacccgcgacccgtgcagcgc
gggggcgactcgcagcggctgggccctgtccacacgccacgcgcgctaccctcccagcaa
ctgggctcccggtcgcccgtgagcgactgcctacgaatcggtgccagcgatggccatggt
gccagcgaggtgcccggcgcgccgcgggtgggcggcgtggacctgggcggcggtccgagc
gccgtcgggaatcggccgacgtctgtcgccgagcgggcgactccgaacgccgcggatgat
gcccacggccttgagaggaagccgtcgctgtttgatgggcggtcgggcgggcggaaaggc
tcgggggatgacacggcggtggctcccgtggaaggcggaggcggtggaggtgacgacgag
gcgaacgcccactgcacccacgcttccaccgctcgcccggatgcggccgcgggcggtacg
gtgggtggcaacatgggggtggctacgggcgtagggcgaatccgcggtgccgaggagtct
gacgattacaccgccttgtga
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