Petromyzon marinus (sea lamprey): 103091844
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Entry
103091844 CDS
T09614
Symbol
SOX7
Name
(RefSeq) transcription factor SOX-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
103091844 (SOX7)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103091844 (SOX7)
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Activator_LAG-3
Motif
Other DBs
NCBI-GeneID:
103091844
NCBI-ProteinID:
XP_032828813
UniProt:
A0AAJ7U5S5
LinkDB
All DBs
Position
3:9245608..9249832
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AA seq
485 aa
AA seq
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MCALSVSLNSRFGAAMQGAHSASPPQPRLGAVYPWGEQTAPVSHQHDHHHHQHQHHHHQQ
QNHIHQQQQHQQQQQPCGKLKSESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKML
GRSWRSLSADEKRPFVDEAERLRIQHMQEHPNYKYRPRRKKQAKRLAAKRLEGGEVLQGE
PALGKRVGLIGAGGAGAGSVGALSPPLPSMSQFREHQQQQHQQHQQQQHQQQQQQHHPHQ
FAMAESYGLPTPEMSPLDVVENEPAFFPPDDGGLLMQGYGDCGAQSSSAAHHHHLPPPAP
HHHHQPGGLNALMHPSPLSSNIYFSEYNFDHQQQHHHHQQQQQSQQQQHHHHHQQQQHLH
HHHQQQQQHHVYPGSPVSMGQLSPPPEPIPTALPDSLEHLSHSDLLEDVDRDEFDQYLDS
AAASVPAASFGHCVGAMSTTSQLSSSSSSSSSSASSSSSSVGGDSNLISIFADATALYYS
SLSFH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcactgtcggtgtcgctcaactctcgattcggcgcagccatgcagggcgctcac
tccgccagtcctcctcaacccagactcggggccgtgtacccgtggggcgagcagaccgct
ccagtatctcatcagcatgaccaccaccaccatcaacatcagcatcatcaccatcagcag
cagaatcatattcatcagcagcagcagcaccaacagcagcagcagccgtgcgggaaactg
aagagtgagtcgagaatacgcagacccatgaacgctttcatggtctgggctaaagacgaa
aggaagaggctcgctcagcagaacccggaccttcacaacgccgagctgagcaagatgctt
ggaaggtcgtggcgctccctgagcgcggatgagaagcgcccgtttgtggacgaggcggag
cggctgagaatccagcacatgcaggaacaccccaactacaaataccgcccccggcgcaag
aagcaggccaagaggctggcggccaagcgcctggagggcggagaagtcctccagggagaa
cctgccctcggcaagagagtcggactcatcggagcgggaggagcgggagccggaagcgtt
ggcgccctgtctccacctctgccatcgatgagccaattcagagagcatcaacaacagcag
catcagcagcatcagcagcagcagcatcaacaacagcagcagcagcatcacccgcatcag
tttgccatggccgagagctatggtttgcccacgcccgagatgtcacccctggacgtggtg
gagaacgagccggccttcttccccccggacgacggaggtcttctgatgcagggctacgga
gactgcggggcgcagtcgtcctctgctgctcatcatcatcatcttcctccacctgctcct
catcatcatcatcaaccgggtgggctgaatgcactaatgcacccttcacccctgagttcc
aacatctatttcagtgaatacaactttgatcatcagcagcagcatcatcatcatcagcag
cagcagcaaagccagcagcagcagcaccatcatcatcaccagcagcagcagcaccttcat
catcaccatcagcagcaacaacagcatcacgtctatccaggatcgcccgtcagcatggga
cagctgtctccaccgccggagcccatcccgaccgccctgcccgactccctggagcacctg
agccacagcgacctcctggaggacgtggacagagacgagttcgatcagtacctggacagc
gccgcggcctccgtgccggccgcctcgttcggccactgcgtgggcgcgatgtcgacgacg
tcgcagctctcgtcgtcgtcgtcgtcgtcatcgtcgtcagcgtcctcctcctcctcctcc
gtcggcggtgactccaacctcatctccatcttcgcggacgccaccgcactttactacagc
tcgctgagcttccactaa
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