Petromyzon marinus (sea lamprey): 116937125
Help
Entry
116937125 CDS
T09614
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116937125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116937125
03009 Ribosome biogenesis [BR:
pmrn03009
]
116937125
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116937125
Spliceosome [BR:
pmrn03041
]
Complex A
U1 snRNP components
U1 related factors
116937125
Complex B
116937125
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
116937125
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
116937125
NCBI-ProteinID:
XP_032800116
EnsemblRapid:
ENSPMAG00000042294
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MPGYSSDRDRSRDRGGGYGGSSSSRFGGGGGGGGGGGSFGGGLRKFGQPGERLRKVKWDL
AKLPKFEKNFYKEHPDVLRRPSREVEEFRMHKEIKIKGTTCPKPVFHFHEADFPSYVMNV
IESQNFKEPTPIQAQGWPLALSGRDMVGIAKTGSGKTLSYLLPAVVHINHQPFLERGDGP
IVLVLAPTRELAQQVQAVAEEYGKSSRVKTTCVYGGAPKGPQLRDLERGVEICIATPGRL
IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ
LAEDFLREYIQINVGSMDLSANHNILQIVDVCSDNEKDNKLMRLMEEIMAEKENKTIIFV
ETKRRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTGE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtactcgagcgatagagatcgctcgcgcgatcgcggaggaggatatggcggc
agctcgagctcgcggtttggcgggggcggcgggggcgggggcgggggcggctcgttcggc
gggggcttgcgcaagttcgggcagccgggcgagcggctgcgcaaggtgaagtgggacctc
gccaagctgcccaagttcgagaagaacttctacaaggagcaccccgacgtgctgcgccgg
ccatccagggaggtggaagagttccgcatgcacaaggagattaagatcaaggggaccacc
tgccccaagccggtgttccacttccacgaggccgacttcccctcctacgtgatgaacgtg
atcgagtcccagaacttcaaggagccgactcccatccaggcgcagggctggcccctggcc
ctgagcggcagggacatggtcggcattgccaagacggggtcgggcaagaccctatcgtat
ctgctgccagcggttgttcacatcaaccaccagcccttcctggagcgtggagacggccca
atcgtgctggtgctggctcccactcgcgagctggcgcagcaggtgcaggccgtcgccgag
gagtacggcaagagctcccgcgtcaagaccacgtgcgtgtatggcggggcgcccaagggg
ccccagctgcgggacctggagagaggcgtggagatctgcatcgccaccccgggccgcctg
atcgacttcctggagtcgggcaagacgaacctgcgccgctgcacctacctggtgctggac
gaggccgaccgcatgcttgacatgggcttcgagccgcagatacgcaagattgtcgaccag
atccggcccgaccggcagaccctcatgtggagcgccacgtggcccaaggaggtgcgccag
ttggcggaggacttcctgcgcgagtacatccagatcaacgtgggctccatggacctgtcg
gccaaccacaacatcctgcagatcgtggacgtgtgcagtgacaacgagaaggacaataag
ctgatgcgcctgatggaggagataatggccgagaaggagaacaagacgatcatctttgtg
gagacgaagagacgctgcgacgagctcacgcgtaggatgagacgcgacggctggcccgcc
atgtgtatccatggagacaaaagccaaccggagcgtgattgggtactcacaggtgagtga
DBGET
integrated database retrieval system
