Petromyzon marinus (sea lamprey): 116937198
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Entry
116937198 CDS
T09614
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116937198
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Protocadherins
116937198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
116937198
NCBI-ProteinID:
XP_032800174
UniProt:
A0AAJ7SJC1
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MDPLRVALLCLCCLRCAVTATAAQASVLSSALRYSVREEEPPGTLVGNLARDLGLTAAQL
HTRGFRVLQGTNASDYLVVSADSGEVRVRGRLDREAVCHRATGDSGCALLLGAVLDRPTE
LARVRVDVLDVNDHAPRFPAESALLEITESAAAGTRFTLDGAHDPDAGANALRRYAMEPD
DGAFALDVHPAGGGGAFAPVLVVRRTLDRERQAVHTYVLTALDGGHPPLTGTTLLTVRVL
DSNDNAPAFDRPVYRARVPENAPVGTPVVQLNASDPDEGANGEVVYTLWAHEAPRVSDLF
AVDSRSGRVTLEGALDYEEANVYEIYVQARDRGPNSIPAYSEVLVRILDVNDNAPDVQVL
VLGQGGGSVTDDAAVVGVSEGVPPGAFVAFVRVKDRDSGPNGRVSCTLESASAVGSGATL
PFALHASDGGEVYALVTATQLDREAAAEYNLTAVARDNGVPPLVSVKTFAVRVTDENDNA
PHFSRSAYELHVPENNIPGAYVGSVSASDSDAQQNAQVDYSIVDSQIDGMLVFAYVSIEP
ASGALYALRAFDHERTRRLEFRVQARDNGAPPLRGEAAVALVIGDVNDNAPVVIAPPLDA
NGTADVYVAPGARAGTLVTQVRASDDDGNENARLSYAIVRGNDCGLFRIDASDGVVRTAR
ALPHEHARHELAIAVRDGGEPAITATATVRVLVTDAHPEGRLLGSSGDDVGGSSGTGGGG
AFKTSFIVIVALGAVSCVLNVAMAMIVLHCKRENKELRIYNCRAADESSARPSPRKNDVM
LVRDELEAAACSKAGSDSDPASVIALDTYEYRSFLPSEAADARAGLTCCSAASRSLPHRE
RDPPIDVQLKPLEKCTRISDPSTWSTPSAALDSLNQIYSSLDHKQFWSKRLKGPTSPVRP
ARGERGNPEPPSPDLLPHEGSSAQEVLGSSSLLLAASVAVGGPAPSSLDGPASRTQAKTG
ADEDVAEKQAPTEQGPVAERERACANSGD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatcctctccgcgttgccctcctttgcctgtgctgcctgcgctgcgccgtcaccgcc
accgccgcccaggcctccgtcctctcgtcggccctgcgctactcggtccgcgaagaggag
ccgccggggacgctcgtggggaacctggcccgcgacctgggcctcaccgccgcgcaactg
cacacccgtggattccgagtgctgcagggcaccaacgcctccgactacctcgtcgtgagc
gccgacagcggcgaggtgcgggtgcgcgggcgcctcgaccgcgaggccgtgtgccatcgg
gcgaccggcgactcgggctgcgccctactgctcggggccgtcctggaccggcccacggag
ctggcgcgcgtccgcgtcgacgtgctggacgtcaacgaccacgcgccgcgcttcccggcc
gagagcgccctcctcgagatcaccgagagcgccgcggccggcacgcggttcacgctggat
ggcgcccacgatccggacgcgggtgccaatgcgctgcggcgctacgcgatggagcccgac
gacggcgccttcgccctcgacgtgcacccggcgggcggcggcggcgccttcgcccccgtg
ctggtggtgcgccgcacactggaccgcgagcgccaggccgtgcacacgtacgtactcacc
gcgctcgacgggggccacccgccgctgaccggcaccaccctgctgaccgtgcgcgtcctc
gactccaacgacaacgcgcccgcgttcgaccggcccgtgtaccgggcgcgcgtgcccgag
aacgcgcccgtgggcacgcccgtcgtgcagctcaatgcgtcggaccctgacgagggcgcc
aacggggaggtggtgtacacgctgtgggcgcacgaggcaccgcgcgtgagcgacctcttc
gcggtggactcgcgctcgggccgcgtcacgctcgagggcgccctcgactacgaggaggcc
aacgtctacgagatctacgtgcaggcgcgcgaccgggggcccaactccatccccgcatac
agcgaggtgctcgtgcgcatcctcgacgtgaacgacaacgcgcccgacgtgcaggtgctc
gtcctcggccagggcggcggcagcgtcacggacgacgcggccgtcgtcggcgtgtccgag
ggggtgccgcccggtgccttcgtggccttcgtccgcgtgaaggaccgcgactctggcccc
aacgggcgcgtgagttgcacgctcgagagcgcgtcggccgtggggtccggcgcgacgctg
cccttcgccctgcacgcctcggacgggggcgaggtctacgcgctggtgacggcgacgcag
ctggaccgcgaggcggccgccgagtacaacctgacggcggtggcgcgggacaacggcgtg
ccgccgctcgtgtcggtcaagacgttcgcggtgcgcgtcacggacgagaacgacaacgcg
ccgcacttctcccgctccgcctacgagctgcacgtgcccgagaacaacatccccggcgcc
tacgtgggctcggtgagcgccagcgactcggacgcgcagcagaacgcgcaggtcgactat
tccatcgtggactcgcagatcgacggcatgttggtgttcgcctacgtgtccatcgaaccg
gcgagcggcgccctctacgccctccgtgccttcgaccacgagcgcacgcgccggctagag
ttccgcgtgcaggcgcgggacaacggcgcgccgcctctgcgcggcgaggcggccgtggcg
ctcgtcatcggcgacgtgaacgacaacgcgccggtggtcatcgcgccgccgctcgacgcc
aacggcacggccgacgtgtacgtggcgccgggcgcccgcgccggcacgctcgtcacgcag
gtgcgcgcgtccgacgacgacggaaacgaaaacgcccgactgagctacgccatcgtacgt
ggcaacgactgtggcctcttccggatcgacgcctccgatggggtcgtgcgcacggcgcgg
gcgttgccccacgagcacgcgcggcacgagcttgccatcgccgtgcgcgacgggggcgag
ccggccatcaccgccacggccacggtgcgcgtgctcgtcacagacgcgcaccccgagggc
cggctcctgggcagctccggcgacgatgtcggtggcagcagcggcaccggcgggggcggc
gccttcaagacatcgttcatcgtgatcgtggcgctgggcgcagtgtcgtgcgtcctgaat
gtggccatggcgatgatcgtgctgcactgcaagcgggagaacaaggagttgcgcatctac
aactgccgcgcggccgacgagtccagcgcgcggccaagcccgcgcaagaacgacgtgatg
ctggtgcgtgacgagctcgaggcggccgcctgcagcaaggcgggctccgatagcgatccg
gcatccgtcatcgcgctcgacacctacgagtaccggtcgttcctgccctcggaggcggcg
gacgcgcgtgccggtctgacctgctgctcggcggcttcgcgcagcctgccgcacagggag
cgtgacccaccgattgatgtgcagttaaaaccgctggagaagtgtactaggatatcggac
cctagcacatggagcaccccatctgctgcattagactctctgaatcaaatttacagtagc
cttgatcataagcagttctggtccaagcgcctaaaggggccgacgtcaccggtcagaccg
gcccggggggaacggggaaatccggagccaccatcgcccgacctcctaccacatgagggt
tcttcggctcaggaggtgctgggctcgtcgagccttcttctggctgcttccgtagccgtc
ggtggacccgcaccctcctcgcttgacgggccggcatcaaggactcaggcaaagacggga
gccgacgaagacgtggcggagaagcaggcccctacggagcagggtcccgtcgcagagagg
gagagggcatgtgccaactcaggggattaa
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