Petromyzon marinus (sea lamprey): 116937434
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Entry
116937434 CDS
T09614
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116937434
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
116937434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
zf-CCCH_4
zf-CCCH_2
New_glue
zf-CCCH
Omega-toxin
Lin-8
Nop53
Motif
Other DBs
NCBI-GeneID:
116937434
NCBI-ProteinID:
XP_032800416
UniProt:
A0AAJ7SKN4
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MCEEPVDIPASAAGRVLRHGPRLAELFGVGVRLGEAEAPRGGEAAVGSRVQIVIRGAGTR
DRSLAKGYILSLCESDLDIASTTGTGTGTGTRPQPRGPQEPHGDPGRPHRRLCRSLCLGP
PAQPWGRAARPGQAEGAAPGPKYLAKMEFALKLGYAEAQVQSVLAKLGEDALTNDLLGEL
ILLQGGQPPLPITPPLPPTDPAGDRPLGEEPPAPPPPATGPRPPAAVAPPTPATGPRPPA
AVAPPTPAEENGGNLRPIVIDGSNVAMSHGNKEVFSCRGIALAVDWFRCRGHRDITVFVP
SWRKEQSRPDAPITDQHVLSQLEQEQVVVLTPSRRVQGRRVVCYDDRFVLRLAHDSGGVV
VSNDHYRDLQAERPEWRRLVEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRVQPLLLL
LPASRRQPCPYGKKCTYGSKCKFHHPERPSVGSQRSLADELRLAASRSEHTASTASTATT
ASTASIATAITSSSTTSTTAYPRLPPGHHHHHHHDPHHHHHHPPLHQRHHRHHPAAASSA
ADFASGRCRRGDDEDEEDEEEEAGEEVGVDEEEELSSAASRMTMRVVSVQQHQQLQHQHQ
QQLQLQHQQLQPQQQPQQHHQQLQQHHQQLQQHHHQQQHHHQQQHRQAPAKCHPPITVTD
SHGTAVVLQCDSPVEDTAASTSSASTSSASTSSSSSSSAAADHSS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaggagcccgtggatatcccggcgtccgcggcgggccgggtgctccgccacggc
ccccgcctggcggagctcttcggggtgggcgtgcgtctaggcgaggccgaggctcctcgg
ggaggcgaggccgcggtggggagtcgcgtccagattgtgatcagaggagccgggacgaga
gatcggagcctcgctaagggctacatcctctccctgtgcgagtccgacctcgacattgcc
tccaccaccggcaccggcaccggcaccggcaccaggccacaacctcgggggccccaggag
ccccacggggaccccgggagaccccaccggcggctgtgccgctccctctgcctggggcct
cctgcccagccgtggggccgcgcggccaggccggggcaggctgagggcgccgcgccgggc
cccaagtacctggccaagatggagttcgcgctgaagctgggctacgcggaggcgcaggtc
cagtcggttctcgctaagctgggagaggatgcgctcaccaatgacctcctgggggagctc
atcctgctgcaaggggggcaacccccactccccatcactccgccccttcctcccaccgat
cccgcgggggaccgccccctgggggaggagcctccggccccgcccccgccggccacaggg
ccccgcccaccggcggcggtggcaccgcccacgccggccactgggccccgcccaccggcg
gcggtggccccgcccacgcctgcggaggagaacggcggcaacctgaggcccatcgtcatt
gacgggagcaacgtggccatgagtcatggcaacaaggaggtgttctcgtgccggggtatc
gcgctggcggtggactggttccgttgccgtggtcaccgtgacatcaccgtgttcgtgccc
agctggcgaaaggagcagtcacggccagacgcccccatcactgaccagcacgtgctctcg
cagctggagcaggagcaggtggtggtgctcacgccatcccgtcgtgtccagggccgccgc
gtcgtctgctacgacgaccgcttcgtgctccgcctggcccacgacagcggcggcgtcgtg
gtctccaacgaccactacagggacctgcaggccgagaggcccgagtggaggcggctggtg
gaggagcggctgctcatgtactccttcgtcaacgacaagttcatgccccctgacgacccg
ctgggccgccatgggcccagcctggacaacttcctgcgtgtgcagccgctgctgctgctg
ctgccggccagcaggaggcaaccttgcccctacggcaagaagtgcacctacggatccaag
tgtaagttccaccacccggagcggcccagcgtcggatcgcagcgctccctggctgacgaa
ctccgcttagccgcaagtcggagcgaacacaccgcctctaccgcctctaccgccaccacc
gcctccaccgcctccatcgccaccgccatcacctcctcctccaccacctccaccaccgcc
tatcccaggcttccgcccggacatcaccatcaccatcaccacgatcctcatcatcatcat
catcatccccctcttcatcagcgccaccaccgtcatcatccggcggcggcttcgtcagcc
gcagactttgcctctggacgttgccgccgcggcgatgacgaggatgaggaggatgaggag
gaggaggcgggggaagaggtgggggtggatgaggaggaggaactctcctcggccgccagt
aggatgacgatgagggtcgtgtccgtgcagcagcatcagcagctgcagcatcagcatcag
cagcagctccagctgcagcatcagcagctccagccgcagcagcagccacagcagcatcat
cagcagctccagcagcatcatcagcagctccagcagcatcatcatcagcagcagcatcat
catcagcagcagcatcggcaggcgccggcgaagtgtcacccgcccatcacggtgaccgac
agccacggcacggccgtggtactgcaatgcgactcccccgtcgaggacacggcggcctcc
acctcctcggcgtccacctcctcggcgtccacctcctcatcctcctcatcctcagcagca
gcggaccactcctcc
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