Petromyzon marinus (sea lamprey): 116937482
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Entry
116937482 CDS
T09614
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116937482
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116937482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116937482
NCBI-ProteinID:
XP_032800485
UniProt:
A0AAJ7SJL4
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MSKAADHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDE
AKRLRALHMKEHPDYKYRPRRKPKSLLKKDRYAFPLPYLSEAEHLKAAASLHGAQPGSAA
AAAAAAAAATAESLLAASEKARSFLQGGPHAGHYSLLQDHHHHHNHHHLSKMNEVTSSLG
AAAAAAAAAAFPYAGLNGYGTGAFSPQHTHTHASPGNPGYMIPCSCPAWPPSSGLQPPLA
YILLPGMAKAGLEPYANHHGAAL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcggcggaccacgtgaagcggcccatgaacgccttcatggtgtggtcgcga
ggccagcggaggaagatggcccaggagaaccccaagatgcacaactctgagatctccaag
cgtctcggcgccgagtggaagctcctcaccgaggccgagaagaggcccttcatcgacgag
gccaagcggctgcgcgccctgcacatgaaggagcaccccgactacaagtaccggccgcgc
cgcaagcccaagtccctgctcaagaaggaccgctacgccttccccctgccctacctgagc
gaggcggagcacctgaaggctgccgcctcgctccacggagcccagccgggctcggcagca
gccgcggccgccgccgccgcggccgctacggcggagtcgctcctcgccgcgtcggagaag
gctcgctccttcctgcagggcggtccgcacgcaggccactactcgctgctgcaggaccac
caccaccaccacaaccaccaccacctctccaagatgaacgaggtcacctcgtcgctgggt
gcggcggccgcggctgcggcggctgccgcgttcccgtacgcggggctcaacggctacggc
accggcgccttcagcccgcagcacacgcacactcacgcctcgcccgggaaccccggctac
atgatcccctgctcgtgcccggcgtggccgcccagctcgggcctgcagccgccgctggcg
tacatcctcctgcccggcatggccaaggctggactggagccctacgcgaatcatcacggt
gccgcgctctga
DBGET
integrated database retrieval system
