Petromyzon marinus (sea lamprey): 116937983
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Entry
116937983 CDS
T09614
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116937983 (DDX4)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116937983 (DDX4)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116937983 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
116937983
NCBI-ProteinID:
XP_032801033
UniProt:
A0AAJ7SM45
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
VCLQAAFLLPVLTLLVRRGLQPNLEPWLQTPSALCVAPTRELITQIYLQALKFSHGTVVR
SVVVYGGTSVVHQLQQLERGCHLLCGTPGRLLDVINRGRVSLSKVEFVILDEADRMLELG
FEQDVRRILDSVPPREQRQTLMFSATFPTEIQKLAGDFLRADYLFVVVGRVGGACCDVRQ
SIERVGNFEKRERLLQLLGDFGLDRTLVFVETKRSADFLACLLCQSGFPTTSIHGDRQQR
EREEALSDFKSGRVSILVATSVAARGLDIDDVRHVVNYDLPGCVDDYVHRIGRTGRIGHC
GSAVGFFDCGRDRDLARPLVRVLSDAGQDVPPWLEEEASGAVGTSFGGVGGTFTSRDVRR
QGSGWMRPSSLHAMNSPPPPPAAAAAAAGGGGEEESWD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtctgcaggcagccttcctcctgcccgtgctcacattgctggtccgtcgtggctta
cagccaaatctggagccctggttacagactcccagcgccctgtgtgtagctcctactcgt
gaactcatcacacagatctacctacaagcactcaagttctctcacgggacggttgttcgc
tccgtggtggtgtacggaggcacgagtgttgtccatcagctgcagcagctggagagggga
tgtcaccttttgtgtggaacccctgggcgtctccttgatgtcatcaacaggggacgggtg
agtctgtcgaaggtggagtttgtgattctggacgaggctgatcgcatgctggagctgggc
tttgagcaggatgtgaggcgaattctggattctgtcccaccacgggaacagcgacagaca
ctcatgtttagtgccactttccctacggagatacagaagctggctggagactttctgcga
gctgactatctgtttgtggtcgtgggccgtgttggaggcgcttgctgtgacgtgcggcag
tcgatcgagcgagtgggaaactttgagaagcgtgagagactcctgcagctgctgggagac
ttcggtctggatcgcaccttggtgtttgtagaaactaaacggagcgcagacttcttggcc
tgcctcctgtgccagtccggattccctacaaccagcatccacggcgaccgtcagcagagg
gagcgtgaggaggccctcagtgacttcaagtctggccgtgtctccatcctggtggccacc
tccgttgctgctcgtggccttgacatcgatgacgtccgacacgtggtgaactatgacctc
ccgggctgtgtggatgactacgttcaccgcatcggccgcacgggacgtatcggccactgt
ggatccgctgtcggattcttcgactgcggccgcgaccgcgatttggctcggccgctcgtc
cgggtgctcagcgacgctggccaggatgttccaccctggctggaggaggaggcgagtgga
gctgtggggacttcgtttggaggcgttggaggaactttcacgtcacgtgacgtgcgcagg
cagggctctggttggatgcgtccttcctctctccacgccatgaactcaccaccaccacca
ccagctgctgctgctgctgctgctggtggtggtggtgaggaagagtcctgggactga
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