Petromyzon marinus (sea lamprey): 116938058
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Entry
116938058 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116938058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
I-set
Ig_3
V-set
LRR_9
Ig_2
LRRNT
ig
Motif
Other DBs
NCBI-GeneID:
116938058
NCBI-ProteinID:
XP_032801122
UniProt:
A0AAJ7SMI3
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MNIVAAFLPTLAGPVARKPKHARTAAGKKQQKQQQRVHDARWFPITPGSPSHRPAFRQPP
RLADEELRLLLLLRRLLRRHLRQLLLPFHLLCHLLRQLLLPFHLLRRLLRQLLLPFHLLR
HRHRLRHLLAPLPGSRAGSIGVVSRRRRGRGGGRQRRRRRRRENSIGGISAAAAAGGGGG
AAVAAAGGGGGGAAATAGGSGTAVAPQQRHRRLRRRLPRQRPRPTAVSAAAGGVGGIGGG
RWWLCALAATALLAPGGGGGGVGAGASPPPTSAAAARACPSLCTCTQELSRVICTRKSLR
EAPSGVPSGAHFLNLQENSLHVVKADSFRQLRQLRVLQLSRNSIRQVEAGAFHGLASLTT
LELFDNRLTAVPSAAFGPVAGLRELWLRSNPIESIPAFAFRPLESLQRLDLGELKHLQFI
SEGAFEGLGNLQYLNLGMCMLREVPNLEPLASLEELDLSGNRVESLRPASFRGLGSLRKL
WMMHAGVRLVQRGSLDGLRSLQDLNLAHNRLASLPHELFGPLGGLRRVHLHHNPWACDCD
VAWLSRWLRGNEPGNVTCCARCSSPPELKGRHVGGLDPPAASRCPPPVIVEGPADVNVSE
GAAAEMRCRAPSPTSSVTWLGPDGAAVALAPEAPAAGRGRGGRPGSGPGPGLRRPSLTAE
GSLNFTSVAARDAGVYTCLVGNAAGNASASATLAVAPAAFPPAPPGAGPNYTYFTTVTVE
TSEAAEPVTGRDEGAAAPGGPGEPRPPPLTPPPGSQGPPPPRQQPPGGAAGAPAAPAGLD
EVMKTTKIIIGCFVAITLMAAAMLVVFYKLRKQHHRQGHRMMQSRAIEIISVDEDVAGGG
AGGPLGVGPGRHHHQQQHLALGLPSPPSGKRPHDSGGPGVGLCSANVALAAGMAGGPGSS
LAAHYGYGKTLPLPPPPPPLPYGYNHHHHHQHQQQQQQHHAGTLGHPALNSYHHTSVHEP
LLLRSSSKENVQETQI
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgtagcggcattcctgcccaccctggccggacccgttgctcgcaaacctaaa
catgcgcgcacagccgccggaaagaagcagcagaagcagcagcagcgcgtgcacgacgct
cggtggttcccgatcacccccgggtctccgtctcaccgccctgcgttccgccaacctccg
cgtctcgccgacgaggaactccgcctcctcctcctcctccgccgcctcctccgccgccac
ctccgccagctccttcttcccttccacctcctctgccacctcctccgccagctccttctt
cccttccacctcctccgccgcctcctccgccagctccttcttcccttccacctcctccgc
caccgccaccgcttgcgacatctcctcgcgccgctccccggcagcagggccgggagtatc
ggcgtcgtcagcaggcggcggagagggcgaggcggaggaagacagcggaggaggaggagg
aggagagaaaattcgattggaggcatctcggccgccgccgctgctggtggtggtggtggt
gccgctgttgctgctgctggtggtggtggtggtggtgctgccgccactgctggaggctcg
ggcacggccgtggcgcctcagcagcgccaccgccggctccgtcgccggctcccccgtcag
cgaccacggccgaccgcggtatcggcggcggcgggcggcgtcggcggcatcggcgggggc
cgctggtggctctgcgcgttggccgcgacggctctgctggcgcccggcggcggcggcggc
ggagtcggcgccggggcctcgccgccaccgacctcggcggcggcggcccgggcctgcccc
tcgctctgcacctgcacgcaggagctgagccgcgtcatctgcacgcgcaagtcgctgcgg
gaggcgccgtcgggcgtgccctcgggcgcccacttcctgaacctgcaggagaacagcctg
cacgtggtgaaggccgacagcttccggcagctgcggcagctgcgcgtgctgcagctgagc
cgcaactccatccgccaggtggaggcgggcgccttccacggcctcgcgagcctcaccacg
ctggagctcttcgacaaccgcctcacggccgtgcccagcgccgcgttcgggcccgtcgcg
ggcctccgggagctgtggctgcgcagcaaccccatcgagagcatccccgcgttcgccttc
cgcccactcgaatcgctgcagcgcctcgacctgggcgagctcaagcacctgcagttcatc
tcggagggcgccttcgagggcctcggcaacctgcagtacctcaacctgggcatgtgcatg
ctccgcgaggtgcccaacctggagccgctggccagcctcgaggagctcgacctgtcgggc
aaccgcgtcgagtcgctgcggccggcctctttccgcggcctcggcagcctccgcaagctg
tggatgatgcacgcgggcgtccgcctggtgcagcgcggctccctcgacggcctgcgttcc
ctccaggacctcaacctggcccacaaccggctggcgtcgctgccccacgagctgttcggg
cccctcggaggcctgcggcgggtccacctccaccacaacccgtgggcgtgcgactgcgac
gtcgcctggctctcccgctggctccgcggcaacgagcccggcaacgtcacgtgctgcgcc
cgatgctcctcgccgcccgagctcaagggccgacacgtcggcggcctcgacccgccggcg
gcctcgcgctgcccgccgcccgtcatcgtcgagggccccgccgacgtcaacgtgagcgag
ggggcggccgccgagatgcgctgccgggcgccgtcgcccacgagctccgtgacgtggctg
gggccggacggcgcggccgtggccctggcgcccgaggcgccggccgcggggcggggccgc
ggcggccgccccggcagcggccccggccccggcctccgcaggccgtcgctcacggccgag
gggtcgctgaacttcacgagcgtggcggcgcgcgacgccggcgtctacacgtgcctggtc
ggcaacgcggccgggaacgcctcggcctcggccaccctcgccgtcgccccggcggcgttc
ccgccggccccgccgggcgccggccccaactacacctacttcaccaccgtcaccgtggag
acgtcggaggccgcggagccggtgaccgggcgggacgagggggcggccgccccgggaggc
cccggcgagccgaggcccccgccgctgacccctccgccggggtcccagggccccccgccg
ccccggcagcagccgcccggcggcgcggccggcgccccggcggccccggcgggcctcgac
gaggtgatgaagacgacgaagatcatcatcggctgcttcgtggccatcacgctgatggcc
gccgccatgctggtggtcttctacaaactgcggaagcagcaccaccggcagggccaccgc
atgatgcagtcgcgcgccatcgagatcattagcgtggacgaggacgtcgctgggggcggc
gccggcgggcctctgggcgtcggccccggccgccaccaccaccagcagcagcatctcgct
ctcggcctgccctcgccaccgagcggcaagcgcccgcacgacagcggagggccgggcgtg
ggcctgtgcagcgccaacgtggccctcgcggccgggatggccggagggccgggatcgtcg
ctggccgcgcactacggttacggaaagacgttgccgctgccgccgccgccgccgccgctg
ccgtacggatacaaccaccaccaccaccaccagcaccagcagcagcagcagcagcaccac
gctggtacgctgggacacccggcgctcaactcgtaccaccacacgtcggtacacgaaccg
ctgctgctgcgatcgagctccaaggagaacgtgcaggagacgcagatttga
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