Petromyzon marinus (sea lamprey): 116938082
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Entry
116938082 CDS
T09614
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116938082
Enzymes [BR:
pmrn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
116938082
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116938082
Prokaryotic type
116938082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Nsp2_AV
Motif
Other DBs
NCBI-GeneID:
116938082
NCBI-ProteinID:
XP_032801146
UniProt:
A0AAJ7SKN1
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MLVGAFCSRYRTQRERALLQPSSSAFRIDLIAKSSRYQNCPGRKRVGPRLAAAIVVCVCV
CVCVWRSCTRLLSILLCTSSNGSLPTMATTSKQPIPTKKTEPELSNIGALPETSGGPPSK
KPKVGATSKESDAGTTAAPTGSGNFEEQISKTRAALASSVLEFRFNKKRVRAVSNADDMA
ANASGILYWMSRDQRVQDNWALLYAQRLALKQRLPLYVCFCLVPKFMDATIRHFGFMLRG
LQEVEKEFRSLDISFHLLKGYAKDVLPPFVNEKNIGAVVTDFLPLRVPRQWVKDLKKALP
KNVPLAQVDAHNVVPCWVTSDKLEYGARTIRRKIHDKLPQFFTEFPPAIKHTYPAKSLPE
ETDWEAAWQSLEVDRSVGEVAWAQPGTSAGLEMLNSFINERLKLFSTDRNNPNSNALSNL
SPWIHFGQISVQRCALEVSKLKPKYRESVDMYIEEAIVRRELGDNFCFYNKNYDSLDGAY
DWAKRSLDAHTQDNREYIYSLQQLEEAKTHDPLWNAAQLQMVVEGKMHGFMRMYWAKKIL
EWTSSPEEALRIAIYLNDRYQLDGSDPNGYVGCMWSICGTHDQGWAERAVFGKIRYMNYA
GCKRKFDVGAYESRYSSKKLGFPAPAE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttggggctttttgttcgcgttaccgaacacaaagggagcgggcgttgttgcag
ccgtcgtcctcagccttccggattgatttaattgcaaaatcttcaaggtaccagaattgt
cccggtcgcaaaagagtagggccccgtctcgcagctgcgatcgttgtgtgcgtgtgtgtt
tgtgtgtgtgtgtggaggtcttgcacgcgcctccttagcattctgctctgcacgagttcg
aacggctcactgcccacgatggccaccaccagcaagcaaccaatacccaccaagaagaca
gagccagagctgtccaatatcggagcgctcccagaaaccagtggaggtcctccgagcaag
aagcccaaagtcggggctacgagcaaggaatctgatgcgggcaccaccgctgcacccaca
ggaagtggaaattttgaagagcagatttccaaaacacgtgcagctttggcgtcatctgta
ttggagttccgcttcaacaagaaaagggtacgcgctgtgtctaatgctgatgatatggcc
gctaacgcaagtggcatcttatactggatgtcacgtgaccagcgtgttcaagacaactgg
gcactactttatgcccagcggctggccctaaagcagaggcttccactctacgtctgcttt
tgtctggtgcccaagtttatggatgcgactattcgacactttggcttcatgcttcgaggc
ctccaagaggttgaaaaggagttccgctccctcgacatctcttttcacctcctgaaaggc
tatgccaaggatgtgcttcctccattcgtaaatgagaagaatattggtgctgttgtgaca
gacttccttcctctccgtgtgcccaggcagtgggtgaaagacttaaagaaagctctgcca
aagaatgtacctttagcacaggtggatgcacacaacgtggtgccgtgctgggtcacgtca
gacaaactagaatacggagcgaggacgattcgcaggaaaatacatgacaagctgccacag
ttcttcactgaattccctccagcgattaagcacacatatccagccaaaagcctgccagag
gagacagactgggaggcggcatggcagtcgttggaggtcgaccggagtgtgggcgaagtg
gcgtgggctcagcccggcacatcagcgggactggagatgctcaactcctttataaatgag
aggctgaagctgttcagcacagatcgcaataaccccaacagcaatgcactcagcaacctc
tcaccgtggattcactttggtcagatctccgttcagaggtgtgctcttgaggtcagtaaa
ttgaaacccaagtaccgcgagtctgttgacatgtacattgaagaggcaatcgtgcgacgg
gaacttggtgacaacttctgcttctacaacaaaaattatgacagtctagatggggcatat
gactgggctaaaaggtccctggatgctcatacacaggacaacagagaatacatttattct
ctgcagcaactggaagaagctaaaactcacgacccactttggaatgcagcgcagctgcag
atggtagttgaaggaaagatgcatgggtttatgcgcatgtactgggcgaagaaaatcctg
gagtggacgagctccccagaggaggccctccgcattgcaatctatctcaacgaccgctac
cagctggatggaagtgacccaaacggctacgttggctgcatgtggtccatctgtggcaca
cacgaccagggctgggctgagcgcgcagttttcggcaagatcaggtacatgaactacgca
ggctgcaaacgcaagtttgacgtgggtgcatatgaaagccgttacagctcgaagaagctg
ggctttccagctccagcagagtaa
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