Petromyzon marinus (sea lamprey): 116938332
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Entry
116938332 CDS
T09614
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116938332
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116938332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
HLH
PAS_9
PAS_4
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
116938332
NCBI-ProteinID:
XP_032801336
UniProt:
A0AAJ7WKQ7
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All DBs
Position
4:4684587..4787488
Genome browser
AA seq
961 aa
AA seq
DB search
MYAGRKRRKPVQRSTKLVPVEGAKSNPSKRHRERLNAELERLAGLLPFQQDVISRLDKLS
ILRLSVSFLRAKGFFHALKSNSGDRIKDASGTSDMVLPEGELLLQALNGFVLVVTSEGLV
FYSSHTIQDYLGFHQSDVINQSVFELIHTEDRSEFQRQLHWAFNPPGGQDSTTGAHAETP
SCSFLVTYNPEQLPPENSSFLERNFVARFRCLLDNSSGFMALHFQGRLKFLHGQNRKAAD
GTQVPSQLALFAVATPLQPPAILEIRTKNMIFRTKHKLDFTPLGCDAKGRVVLGYTEIEL
CMRGTGYQFIHAADMLHCAENHVRMMRTGESGLTVFRLLTKDKGWTWVQANARLVYKNGR
PDYIIATQRPLSDEEGAEQLRKRSLHLPFTYATGEAVLYECSFTLPPSLDPMQPKGHGGG
GRGKKGSGSKGAAGGSGARGSLDPDSLLGAMLRQDESVYVCPPDPVPKFSFSKSYFSELG
SMGSLDVVDQLSRGRAVDRATITEESSADMKPDINTALMLTHELADFGQQSCSTMPGLGL
GGEGDSDDGAGGDLLSALQCFGIGVDELDVFEQDERLVMLELDSLSAQLNETISNMDILD
YVDDSLSRRTGQLSQGELPAKPESSLSCPSSSQSLAYIQPQVTNQQQQPQQPQQQQQQPP
AKQAHQQMFYKPKINRRYTSWDEQQQHAAMQQHPQTSHQPQRQRLQSMQHQAGAPIVNGQ
IQQRAQQQQQQQQVMQSYRYTPLDDGGEQYNVEAATAAAYTQSFPPCQQMQLNSGVAVDS
SSSSSYGRLGCSSSSSSNGAAQSGEGQCRTAAAGSSICGYATQLQQFVPSKMPAAQSFML
KQNFNLLSSCQYQSQQCPATVMKEQLTGEVSERQQQQRHQLQQQQQQEEEDLLMSCSGIS
CTLEQERQYKLPMDRNIGNGNVLYQGVNCEQLSSFPDGETLPVHPGMSQPMPDAMQYFLD
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccggacgtaagaggagaaagcctgtccagcgaagcaccaagctggtgccggtg
gaaggagccaagtctaacccatccaagcggcatcgcgagcgcctgaatgcagagctggaa
cggctggctgggttgctgcccttccaacaggacgtcatctcccggctggacaagctgtcc
atcctccgcctcagcgtcagcttccttcgtgccaagggcttcttccacgccctgaaaagc
aacagtggtgaccggatcaaggatgcctcagggacaagcgacatggtcctacccgagggt
gaactccttttacaggccctcaacggcttcgtgttggttgtcacatcggagggactcgta
ttttactcatcacacaccattcaggactaccttggctttcaccagtccgatgtcatcaac
cagagtgtgttcgagctcattcacaccgaggaccgcagcgagttccaacgccagctgcac
tgggcgttcaacccaccgggcggacaggacagcactacgggggctcacgcagagactccg
tcctgctcgttcctggtgacgtataaccccgagcagctgccacctgaaaattcttccttc
ctggagcgcaactttgtagcgcgattccgctgcctcttggacaactcctctggatttatg
gcgctgcacttccagggccgcctcaagttcctgcacgggcagaaccgcaaggcggctgac
ggcacccaggtgccgtcgcagttggcgctgttcgccgtcgccacgccgctccagccgccc
gccatcctggagatccgcaccaagaacatgatcttccgtaccaagcacaaactggacttc
actcccctcggctgcgatgccaagggccgtgtggtgttgggctacacagagatcgaactt
tgcatgcggggcacgggataccagttcatccacgctgctgacatgctgcactgcgcagag
aatcacgtgcggatgatgaggaccggagaaagtggcctcacggtgttcaggcttctcacc
aaggacaaaggctggacctgggtccaagcaaacgctcgcctcgtgtacaagaacgggagg
cctgactacatcattgcaactcagcggccactttcggacgaggagggagcggagcagctg
cgcaagcgctcgttgcacctgcccttcacgtacgccacgggcgaggcggtgctctacgag
tgcagcttcacgctgcccccgtcgctcgaccccatgcagccgaaggggcacggcggcggt
ggccgtgggaaaaagggctcgggctccaaaggggcagccgggggatcgggtgctcggggc
tcgctggatcccgattctttgctgggcgcgatgctccggcaggacgagtcggtgtacgtg
tgtccgcccgaccccgttcccaagttctctttctccaagagctacttctcggagctgggc
agcatgggaagcttggacgttgtggaccagctgtcgaggggccgtgcggtcgacagggcc
accatcacagaggagtcctccgccgacatgaagccggatattaacacggctctcatgctc
acacacgagttggctgactttgggcagcagagctgctccacgatgcccggcctcggcctc
ggcggcgagggcgacagcgacgacggggccgggggcgacctcctcagcgccctgcagtgc
ttcggcatcggcgtggacgagctggatgtgttcgagcaggacgagcggctcgtgatgctg
gagctcgactcgctgtcggcgcagctcaatgagaccatctccaacatggacatcctggac
tacgtcgacgactcgctgagccgccgcacggggcagctctcccagggggagctcccggcc
aagcctgagagctccctttcctgtccaagctcatcgcagagtctcgcttacatacagccg
caagtgactaatcagcagcagcagccgcagcagccacagcagcagcagcagcagccgcct
gccaagcaagcacatcagcaaatgttttacaagccgaagataaacaggagatacaccagc
tgggatgagcaacagcaacacgcagcaatgcagcagcatccccagacgtcacaccagccc
cagcggcagagattgcaatcaatgcagcaccaagcaggggccccgatcgtcaatgggcaa
attcagcagcgcgcacagcagcagcagcagcagcagcaagtaatgcagtcttaccgatac
actcctttggatgacggtggtgagcagtataacgtggaggctgctactgccgccgcttac
acccagagctttccaccctgtcagcaaatgcagctgaacagcggggttgcggtcgacagc
agcagcagcagcagctacggccgcctgggctgcagcagcagcagcagcagcaacggggcg
gcccagtcaggggaagggcagtgcaggacagctgcagctggaagctccatctgtggctat
gccactcagctgcagcagttcgtaccctcaaagatgccggctgctcaaagcttcatgctg
aagcagaactttaacctgctgtcctcttgccagtaccagagccaacagtgcccagctact
gtcatgaaagagcagctcaccggcgaggtatctgagcggcagcagcagcagcggcaccaa
ctgcagcagcagcagcagcaggaggaggaggacctcctgatgtcttgttcaggcatctca
tgcacactggaacaggaaaggcagtacaagctccccatggaccgcaacatcggaaatggc
aacgtgctctaccaaggcgtcaactgcgagcagctgagcagttttcctgacggagaaacc
cttccagtccaccctggcatgagccagcccatgcctgatgccatgcagtactttctggac
tcataa
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