KEGG   Petromyzon marinus (sea lamprey): 116938498
Entry
116938498         CDS       T09614                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 homolog 1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116938498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116938498
   03041 Spliceosome [BR:pmrn03041]
    116938498
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116938498
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116938498
Spliceosome [BR:pmrn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116938498
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Sin3a_C
Other DBs
NCBI-GeneID: 116938498
NCBI-ProteinID: XP_032801523
UniProt: A0AAJ7SL95
LinkDB
Position
4:complement(5904153..5914440)
AA seq 580 aa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NT seq 1743 nt   +upstreamnt  +downstreamnt
atggagtttcatgaggattcctgggatatcgatgagggtgctgacagttcagagcacacg
ttccggggcgaaatgcgttcaagacctccatcccacttaaaaacggagaaaaaagctgag
caccatttttacgatcgtgagccagagcagttccggaaactgttcgttggagggcttagc
tttgagacaacagaagagggcctccggcagtactttgagcaatggggaagcctaaccgac
tgtgtggtcatgaaggacacacaatccaagcggtcgaggggctttggcttcgtgaccttt
tcgagcatgtcagaggttgacgcagcaatgtctgcccggcctcacaagatcgacgggcga
atggtggagcccaagcgggcagtgtctcgagaggactcgatgcgacctggagctcacttg
tctgttaagaagatctttgttggtggaatcaaagatgataccgatgaagaacatttgcga
gattactttgaaaagtatgggaggattgaaattgttgaagttatgacggagagggaatct
ggaaaaaagagaggctttgcctttgttaccttcaatgaccatgaccccgtggataaaatt
gttgttcaaaagtatcacaccatcaacggacacaactgtgaaatcagaaaagcccttcca
aagcaagagttgcaaaattacggcagaggccgaggaggatataacagagattttggtcct
tctggtggaagggggggtggttttggtcggggaaattatggaggcggagatttcaacggt
tgtggtgatggtggaaactttggcggcggaggaggtggtggatatggtgggggtggtaga
ggcggttttggcggcggtggcggctatggcaaccagggaggtggtggctatggaggagga
gggggttttggtggcggcggcagcggctttgggaaccaaggaggaggaggtggctttggg
ggaaacatgggtggtggaggctatggcaaccatggaggaggaggaggcggaagctatggt
ggtggaggaaactaccaaggaggtggtggtggttatggtggacatggtggacatgggggt
ggtggttatggagggagtggacatgggggtggtggttatgggggtggtggacatggaggt
gggggtggtggttatgggggtggtggacatggaggtgggggtggtggacatgggggtggg
ggtggtgggtacgggggtggacatggtgggggtggacatggtgggggtggacatggacat
ggtgggggtggtggtggacaaggcggcgggggtggccatgggggtggccatgggggtggc
aattatggtggtggcggtggaagcagcggatatggaggcggaggcagcggatatggaggc
ggcgggagctacagcggtggaggaggtggctataaccagcacggcgggggcggcggcggt
ggcggcggcggcaactatggtggtggcgatgtagcaagtcagaccagtacaggaacagtc
gctcttgcaggtaactttggaggcggcggtggcggcggcagcaatttcaacgactttggc
aactacagcagccagggacattcgcattacggccctttgaagggaggccacggtggtgat
ggtggtggtgggagcagtggcagttacagtggccccaggagcggtggcggtccctacgga
ggtggctatggttcctcggggagtgatggcggaggctatagaagcggacgcaaccgatat
tag

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