Petromyzon marinus (sea lamprey): 116938512
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Entry
116938512 CDS
T09614
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1-like
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116938512
04131 Membrane trafficking [BR:
pmrn04131
]
116938512
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
116938512
Membrane trafficking [BR:
pmrn04131
]
Autophagy
ER-phagy
ER-phagy recepters
116938512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
MnmE_helical
YwqH-like
DUF3772
Motif
Other DBs
NCBI-GeneID:
116938512
NCBI-ProteinID:
XP_032801549
UniProt:
A0AAJ7SLL2
LinkDB
All DBs
Position
4:6600836..6620431
Genome browser
AA seq
714 aa
AA seq
DB search
MEQPQEPPTGSGSGGGEDSGARHLSLAVFHNVPPAYIPEVAIECHYSLAPELHPHTKDWV
GIFKEGWRRPRDYVTFLWSPLPEERGEQGKPAECSVQFQAYYLPREDGHSYCFCYVSHEG
RVCGVSTPFRFRRPRHSGPDELLAMEEDALDVLVVTTRSELLQKRLLELQEEGAELRQLQ
LALEEERGELQEKLVTLEATLRDEKDERDVLGQELAALRVREAELGAECERGRHSQEEAL
ARLHLLESDIAALSSKLLAKETHIDRLKDQLRKLGVENEQLRSQMKKVLEEKELYKEHLR
GREVEEKELLEELGALRERLSVREAESASCHQEVSSCREQLVQAARDQEELARVREELRV
ALDQLGSGEQRLVLLGEELARAASARDSAIAELYRQRLDGDSVRGQLVAAERAAHESREA
WEVERDALVHQAQEVKDRVAGMSENIHKLLQSLQEERLLNSGLQRKLKETEECGKVQLSE
KLRELREMKAALAVLRNEKQTLEVDRQRLQEHVKELERGGEAKAVAAPVVPPRATPPCPP
PGAPGPHGPHGPPGAPAAQPSMGGYLPGPLRPYSESCTEKPAAVKEKPPLELGGVERKTL
QDLERVPDVTAARPAPRGAHVVCSQPGPSSPRLDSMFDWPDSLAGFGDEDEAMKLSCSPP
LSPLSRHLQYLDFESLAAEPPLSSRAEHKECPQCGMVFPPAYDHSLFEKHVSKH
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgcaggagcctcccacagggagcggcagtggcggcggagaggacagcggc
gctcgccacctctccctcgccgtgttccacaacgttccgcctgcctacatccccgaggtg
gccatcgagtgccactactcactggcgccagagctgcacccacataccaaggactgggtc
ggcattttcaaggagggctggcgccgccccagggactacgtcacctttctctggtctccg
ctgccggaggagcgcggcgagcagggcaagcctgcggagtgcagcgtgcagttccaggcg
tactacctcccgcgcgaagatggacacagctactgcttctgctacgtgagccacgagggc
cgcgtgtgtggcgtgagcacgcccttccgcttccgccggccccgccacagcggccccgac
gagctgctcgccatggaggaggacgctctggacgtgctcgtggtcaccacgcgctccgag
ctgctccagaagcggctactggaactgcaggaggagggcgcggagctgcggcagttgcag
ctggcactggaggaggagcggggagagctgcaggagaagctggtgacgctggaggcgacg
ctgcgtgacgagaaggatgagagggacgtgctgggccaagagctagcggccctgcgtgtg
cgcgaggcggagctgggagcggagtgtgagcgaggtcgccacagccaggaggaggccctt
gctcgcttgcacctcctggaaagtgacatcgccgccctaagcagcaagctcctcgccaaa
gagacccacatcgatcgcttaaaagatcaactgagaaagctgggcgtggaaaacgagcag
ctgcgcagccagatgaagaaagtgcttgaggaaaaggagctgtacaaggagcacctgcgc
ggccgtgaggtggaggagaaggagcttctggaggagttgggcgcgctgcgggagcgcctg
tccgtccgtgaggccgagtccgccagctgccaccaggaggtgtcctcctgtcgcgagcag
ctggtgcaggcggcacgcgaccaggaggagctggcgcgcgtacgtgaggagctgcgggtg
gcactagaccagctgggctcgggcgagcagcgcctggtgctgctgggcgaggagctggct
cgcgccgcctcagcgcgggacagcgccatcgccgagctctaccgccagcgcctcgacggc
gacagcgtgcgcgggcagctggtggcggcggagcgcgcggcgcacgagagccgcgaggcg
tgggaggtggagcgcgacgccctcgtgcaccaggcgcaggaggtgaaggatcgggtggcg
ggaatgtctgagaacatccacaagctgctccagagcctgcaggaggagcgcctgctcaac
agtgggctgcagcgcaagctcaaggagactgaggagtgcggcaaggtgcagctgtcagag
aagctgcgggagctgcgcgagatgaaggctgcactcgccgtgctgcgcaatgagaagcag
acgctggaggtggacagacagaggctgcaggagcacgtgaaggagctggagcggggcggt
gaagcaaaggcggtggcggcaccagtcgtgcccccccgtgccacgccaccctgcccgccc
cccggggcccccggaccccacggaccccacggaccccctggtgcccctgcagcccagcct
agcatgggcggctacctcccggggcccctgcgcccctacagcgagagctgcacagagaaa
ccggctgctgtaaaggagaaaccgcctctggaattaggcggggtagagcgcaagacccta
caggacctggaacgagtgccggacgttactgccgcgcgcccagccccaaggggcgcccac
gtagtgtgcagccagcctggacccagctccccccgccttgactccatgtttgactggcct
gactcgctggcgggcttcggggatgaagacgaagccatgaagttgtcgtgctctccgcca
ctttcccctctgtcacgacatctgcaatacctggactttgagagcctggccgcagagccc
cccctcagctccagggctgagcacaaggagtgtccacagtgtggcatggtgtttcctccg
gcatacgaccacagcctgtttgagaagcacgtgagcaagcattag
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