Petromyzon marinus (sea lamprey): 116938527 Help Entry 116938527         CDS       T09614                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04510   Focal adhesion pmrn04512   ECM-receptor interaction pmrn04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pmrn00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116938527    04518 Integrin signaling     116938527  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116938527  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pmrn00536]     116938527 Glycosaminoglycan binding proteins [BR:pmrn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116938527 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd TILa Motif Other DBs NCBI-GeneID:  116938527 NCBI-ProteinID:  XP_032801589 UniProt:  A0AAJ7WKY4 LinkDB All DBs Position 4:complement(7187169..7235784) Genome browser AA seq 1491 aa AA seqDB search MFSFVHSRTLLLLVATQAIITVVRSQDDYDDEVGSCTQDGQKYSDKDVWKPEPCRICVCD NGNILCDDIICEPLKNCPNPEIPFGECCPACPTSESNGNGRRVGTRGQKGEPGDVPETNG IRGPPGAQGPPGEQGSRGDRGDKGEKGGQGPRGRDGEPGTPGNPGMPGPPGPPGPPGLGG NFAAQMAGGFDEKSGGGAQMGALQGPMGPMGPRGPPGPSGSPGPQGFQGSPGEPGEPGPS GGLGPRGPPGPAGKPGDDGEAGKSGKPGERGPAGPQGARGFPGTPGLPGIKGHRGYPGLD GSKGDAGAAGAKGESGASGENGAPGPLGPRGLPGERGRPGASGPAGARGSDGLPGPAGPP GPTGPSGSPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGAAGASGPSGAPGNPGTDGLP GAKGSSGSPGIAGAPGFPGPRGAPGPQGATGPLGPKGQQGDPGVHGFKGEPGPKGEPGPA GLQGPPGPAGEEGKRGARGEPGAAGPGGPPGERGGPGNRGFPGQDGLPGPKGAPGERGPP GAAGPKGSNGDPGRPGEAGLPGARGLTGSPGSPGSEGKPGPQGAPGEDGRPGPPGPQGAR GQPGVMGFPGPKGASGEPGKAGEKGIPGAAGLRGLPGKDGETGPSGPPGPAGAVGERGEQ GPPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGQPGQAGPRGERGFPGERGASGPQGLQ GSRGLPGTPGSDGPKGATGPSGPSGAQGPPGLQGMPGERGTAGAPGPKGDRGDGGEKGPE GAPGKDGSRGLTGPIGPPGPSGSAGDKGEAGPPGPTGPAGTRGSPGERGETGPPGPAGFA GPPGSDGQPGAKGEQGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKGARGAQGPSGAT GFPGAAGRVGPPGPNGNPGPPGPPGPGGKDGPKGIRGDSGPAGRSGEPGLQGAAGPPGEK GEPGEDGPSGPEGPPGPMGLAGQRGIVGLPGQRGERGFSGLPGPSGEPGKQGSPGPSGER GPPGPNGPPGLSGPPGEQGRDGNPGSDGPPGRDGSSGQKGERGENGSPGQPGAPGAPGAP GPVGPTGKNGERGESGPQGPIGPPGPAGARGLPGPQGPRGDKGENGEHGERGMKGHRGFT GLQGLPGPPGSPGDQGTAGSLGPAGPRGTPGPTGPPGKDGSNGLPGPIGPPGPRGRTGET GPAGPSGPAGLPGPPGPPGPGMDMSGMAMMGSQEKAPDPMRFYRGDQASADLRQHDAEVD ATLKSLTNQIDSIRSPEGSRKNPARTCRDLKLCHPEWKSGDYFIDPNQGCTLDAIKVFCN MESGETCVYASPQNVPRKSWWTNKSKDRKHIWFGETMNSGSQFNYGDDSLPPNTAAIQMT FLRLLSTEASQNITYHCKNSIAYMDEQAGNLKKALLLQGSNDIEIRAEGNSRFTYNVLED GCTKHTGDWGQTVLEYRTQKTSRLPIVDIAPLDIGGVDQEFGVDIGPVCFL NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtgcactcaaggactctcttgctgcttgtggcaacgcaggcgataata acggtggtcagaagtcaagatgattatgatgacgaagtaggaagctgtacacaggatgga caaaagtatagtgacaaggacgtctggaagcctgagccatgtcgtatctgcgtctgcgac aatgggaacattctctgcgacgacatcatctgcgagccgctgaagaactgccccaaccca gagatccccttcggggagtgctgccccgcctgcccgacgtctgaatccaacggcaacggc agacgtgttggaaccaggggacagaagggggagcctggagatgtaccagagaccaatggc atcaggggtccacccggagcccagggtccacctggcgagcagggatccaggggtgatcgt ggagacaagggagagaagggaggccaaggccctcgtggcagggatggcgagcctggcact cccggaaaccctggcatgcccggacccccaggccctcctgggcctcctggccttggtgga aactttgctgcccaaatggccggaggctttgatgagaagtctggaggtggtgctcaaatg ggagctcttcaaggaccaatgggacctatgggaccaaggggacctccagggccttcaggc tcacctggcccgcaaggattccagggctcccctggagagcccggcgagcctggaccttct ggagggcttggcccacgaggacccccaggcccagctggaaagcccggcgatgatggcgag gctggcaagtcaggaaaaccaggtgaacgtggacccgcaggaccgcagggtgctcgtggt ttcccaggaacccctggccttccaggcattaagggacaccgggggtaccctggcctagat ggttctaagggtgacgctggggctgctggtgccaagggtgaatctggtgcttccggtgag aacggcgcccctgggcccttgggtccacgtggtctgcctggtgagagaggtcgccccggt gcctctggtcctgctggagcccgtggctctgatggtctccctggtcctgctggccctccc ggccccactggtccatctggctcccctggttttcctggagccccaggtgctaagggtgaa gctggccccaccggagcacgtgggccagaaggtgcccagggctctcgcggagagcccggt gctgctggggcttctgggccgtccggcgcccccggtaaccctggcactgatggacttcct ggagccaaaggatcatctggttctccaggtattgccggtgcgcccggattcccaggcccc cgtggagctccagggccccagggtgcaactggccctcttggccccaagggacagcagggt gacccaggtgttcatggattcaagggagagcctggccccaagggcgagcctggccctgcc ggtcttcaaggtccacccggcccagctggagaggaaggcaagcgcggtgctcgtggagaa cctggagcagctggccccggtggcccacctggcgagagaggcggccctggaaaccgtggt ttcccaggacaggatggccttcccggtcccaagggtgcccctggtgagcgtggtccccct ggcgcagctggccccaagggctccaacggtgaccctggtcgccctggtgaagctggcctc cctggagctcgcggtcttactggcagccctggaagccctgggtctgaaggaaagcctggt cctcagggtgcccctggtgaggatgggcgacctgggcccccaggtccccagggagctcgt ggacaacccggcgtcatgggcttccctggacccaagggcgcatctggagagcctggcaag gctggcgagaaaggcatccctggagccgctggcctgaggggtctgcctggcaaagatgga gagaccggcccatccggaccacctggcccagccggcgctgttggcgagagaggagagcaa ggtcccccaggtccctctggcttccagggtctgcctgggcctcccggcccccctggtgag ggtggaaagcctggtgaccagggtgttcccggagaggctgggcagcctggacaggccggc cccagaggagagcgtggcttccctggtgagcgtggcgcttctggacctcagggactccag gggagccgtggacttcccggcactcctggctctgatggccccaagggcgccaccggtcct tcaggcccatctggggctcagggaccacctggcctgcagggcatgcctggggagcgcggc acagctggtgctcctggtcccaagggagacagaggtgacggcggagagaaaggaccggaa ggtgctcctgggaaggatggttcacgaggcttgactggtcccatcggtcctcccggccca tcaggcagtgctggtgacaagggtgaagctggacctcctgggcctactggccctgctggc acccgtggatctcctggcgagcgtggagagaccggtcctcccggccctgctggattcgct ggccctcctggttcagatggacaacccggtgccaaaggagagcagggagagtcgggtcag aagggagatgctggtgcccctggtcctcagggtcctgcgggctcccccggtccccagggt cccaatggcgttcctggtcccaaaggtgcacgtggcgcacaaggtccatctggtgctact ggattccctggagctgctggcagagtaggcccacccggccccaacggcaaccctggtccc cctggcccacctggcccaggaggcaaagacggacccaagggaatccgtggagactccggc cctgctggccgctctggcgagcctggactgcagggagccgctgggcctcctggcgagaag ggcgagcccggcgaggatgggccctctggccctgaaggtcccccaggccccatgggtctc gcaggccagcgtggtattgttggtttgcccggccagcgtggtgagaggggcttctccggc ctccccggcccatctggcgagcctggtaagcaagggtcccctgggccatctggagaacga gggccccctggccctaatggcccacctggcctgtctggcccccctggcgagcagggacgt gatggaaatcctggctctgatgggcctcccggccgtgatgggtcttctggacagaagggt gagcgtggagagaatggctcgccaggacagccaggtgcccccggtgccccaggtgccccc ggaccagttgggcctaccggcaagaacggcgagaggggagagtcgggtcctcaaggccca ataggtcctcctggcccagctggggctcgtggtctgcctggcccacaaggtcctcgtggt gacaagggtgagaacggcgagcacggcgagaggggcatgaagggacacagaggcttcacc ggtctccagggtctgcctggtcccccgggttcccctggtgaccaaggtactgctggttcc ctgggccctgccggtcctcggggtactcctggccccactgggcctccaggcaaggatggc tctaatggtctccccggccccatcggtccccccggcccacgcggtcgcactggtgaaacc ggccctgctggtccatccggtcctgctggcctcccaggtcctcctggtccacctggccct gggatggatatgtctggcatggccatgatgggctcccaggagaaggccccggatccaatg cgattctaccgtggcgatcaggcctcagctgatctgaggcagcacgacgctgaagttgat gccactctcaagtcgctcaccaaccagattgacagcatccgcagccccgagggctctcgc aagaatccagcacgcacttgccgggacctgaagctctgccaccccgagtggaagagtggt gactacttcatcgatcccaaccagggctgcacgctggatgccatcaaggtgttctgtaac atggagtcgggcgagacctgcgtctatgccagcccacagaacgttccgcgcaagagctgg tggaccaacaagagcaaggaccgcaagcacatctggttcggagagacaatgaacagcggt tcacaattcaactacggtgatgacagcctgccaccaaacacagcggccatccagatgacc ttcctgcgcctgctgtccaccgaggcttctcagaacatcacgtaccactgcaaaaacagc attgcctacatggacgaacaggccggcaatcttaagaaggcgcttctgctccagggctcc aacgacatcgagatccgcgccgagggcaattctcgctttacctacaatgtgctggaggac ggatgcacgaaacacacaggggactggggccaaacagtcttggaatacagaacacagaag acatcccgcctgcctatcgtcgatatcgctcctctggatatcggtggtgtggatcaggag ttcggcgtggacatcggcccagtctgcttcttgtaa

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