Petromyzon marinus (sea lamprey): 116938552
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Entry
116938552 CDS
T09614
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116938552
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116938552
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
MOEP19
Motif
Other DBs
NCBI-GeneID:
116938552
NCBI-ProteinID:
XP_032801680
UniProt:
A0AAJ7WL70
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Position
4:complement(8369401..8477336)
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AA seq
580 aa
AA seq
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MAWPMALSRPHHHTGPMTNRALEAMAYANSSYTLPALFNMPVYPCLSFPSPVPSWVGESD
GISLHCGGEGGAMDGSTKEGGLSVTLTIRLLMHGKEVGSIIGKKGETVKKMREEVRSSGA
RINISEGSCPERIVTITGPTDAIFKAFAMIAEKFEEDINSSMTNSTVTSKPPVTLRLVVP
ASQCGSLIGKGGSKIREIRESTGAQVQVAGDLLPNSTERAVTISGTPEAIIQCVRQICVV
MLESPPKGATIPYRPKPAASAPVIFAGGQVRPDGLAAHAGNPAVLPHHPPALTAYTIQGQ
YAIPHPDDSCLGIDIYGCAPWLSSMQKAYDSFGAASAHYMHHTMQNPLTKLHQLAMQHSP
FTPLGQTTPGFPAGLDNAQTTSHEITIPNDLVGCIIGRQGSKINEIRQMSGAQIKIANAV
EGSAERQITIIGSPANISLAQYLINASLDMAKAANQSASGQNPVDLNLPQPVSSSSSSTT
TTTTPLASAPTPLAAAAAVTPHHHPAPPPTYAVPVSVSSLLGLKAVPLLALNAAAAAAAA
APGASLAGLAGLTAYTAKMPSAAASATGGKKGERQKFAPY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcccatggccctgagtagacctcaccaccacacggggcccatgaccaaccgg
gctctggaagcaatggcttacgctaattcctcctacacgctgccagccttgtttaatatg
ccggtgtacccgtgcctgagcttcccgagccccgtgccctcgtgggtgggagagagcgac
ggtatcagcctgcactgcgggggcgagggcggcgccatggacggcagcaccaaggaggga
ggcctgagtgtcacgctaacgatccgcctgctcatgcatggcaaggaggttggaagcatc
attggtaagaaaggggagacggtgaaaaaaatgcgcgaggaggtacggtcgagcggcgca
cggatcaacatctccgagggctcgtgtcctgagcgaatcgtcaccatcaccggccccact
gacgccatcttcaaagccttcgcgatgatcgcagagaagtttgaagaagacattaacagc
tccatgacaaacagcacagtgaccagcaagccgcccgtcaccctgcgtcttgtggtgcca
gccagccagtgtggctcgctcatcggcaagggtggctccaagatccgtgaaatccgagag
tcgacaggggcacaggtgcaggttgccggcgacctgctgccaaactccacagagcgagcc
gtcacaatttctggcacgcctgaagcaatcatccaatgtgtgcggcaaatctgtgtggtc
atgctggagtccccacctaaaggtgccaccatcccgtaccggcccaagccggccgcttcc
gccccggtgattttcgctggcggtcaggtaaggccggatggcctcgccgctcacgcgggc
aaccctgccgtcttaccgcaccacccgccagccctcacagcgtacaccattcagggacaa
tatgccattcctcacccggatgattcgtgcttagggatagatatatatgggtgtgcacca
tggctctccagcatgcaaaaggcatacgattcttttggagctgcttctgcccattacatg
catcatacaatgcaaaacccgttgaccaagctccatcagctggctatgcagcattcccct
tttacccccctcggacagactacccctggtttccccgcaggtctggacaatgctcagaca
acctcacatgaaattaccattcccaatgatctggtaggatgcataatcggaagacaaggc
agtaaaatcaacgagatcagacagatgtccggagcgcagatcaagatcgccaatgcggta
gaaggctcggcagaacgacagatcaccatcataggatcgccagccaacatcagcctggca
cagtacctcatcaatgcaagcctggatatggctaaagccgccaaccagtctgcctccggc
cagaaccccgttgacctgaacctccctcagcccgtctcctcctcctcctcctccaccacc
accaccaccaccccactagcctccgcccccacccccctggctgcagcggcggctgtgacc
ccccaccaccaccctgctcctcctcccacctacgccgtgcctgtctccgtctccagcctg
cttggcctcaaggccgtcccgctgctggccttaaatgcggcggcggcggctgccgctgcc
gcccctggggcctcgctggcgggcctggctggcctgaccgcttacacggccaaaatgccg
tccgcagccgcatctgccaccgggggcaagaaaggcgagcgccagaagtttgctccgtat
tga
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