Petromyzon marinus (sea lamprey): 116938557
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Entry
116938557 CDS
T09614
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116938557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116938557
Membrane trafficking [BR:
pmrn04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
116938557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank
Ank_2
PH_6
SH3-A_UBE2O
Roc
Motif
Other DBs
NCBI-GeneID:
116938557
NCBI-ProteinID:
XP_032801718
UniProt:
A0AAJ7SLM3
LinkDB
All DBs
Position
4:complement(8747751..8919838)
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AA seq
1558 aa
AA seq
DB search
MMDPHDSPVPGRRGEFQRRTVCRISVTLVRKEPLALKEDGSVPAGEFAPAAKGRDVASAL
NGDCAGREGARAGSYESLTRSGLAMGRRGASGKAYGDGRFDTKVLPSNAALQRAPADNFK
RGVMLAEMEVHNRPSKGNDPASLDGAAGSPVGSAAGAAPGKSGRDGADAQPWRPAMAPEQ
RKRAHTVSCITGRVDVPPPSPRALHQTVWRRNPELVFLLGERARRSARLLQEERANRCLP
PGRDGLEPGLGEQGFLSTSDATGHCPPAWHEPHEKEKHFQKKNDLPVDSTSSSPAHAFLK
VEQKPHMEAVKPATHEGDANQSVTFQPDACNPRVKPCNKATSEEDYEGSSSASTRSGRLC
VEAERQTTPQVHSGGVGNVIDASAGDQVQNSEAEMVVAHHRARSHSCAMATAAEALARRR
FQPELTDVPEVAASRQARPALRKRSLSLGQKFRELSLGRKLSSIRGRGGGPSTDDEKESG
APGGGGRNLSIEPKDGEMNGERGGRVVRSPRRDKPVAEESRVKRLLSGAFIKKRDVVSAS
PSRGVLAGSWELLPGAPQGGAHASDDSFVNSQEWTLCRGVPELHVGIVGNLGCGKSALVH
RFLTGAYVREESPEGGRFKKEMVADGQSLLLLIRDEGAPPTEQFASWLDGVMLVFALSDE
TSFQSVARYHQQLSSLCSLSELPTLLVGTQDAIGPGSPRTVEDARARRLCSELRIGTYYE
TCATYGLNVERVFQEVAQRIVATRKKQQLSIGLCKPMVTSPSAPVVPSSPMGPLSPHPAQ
PSALHGGLYSQTHVAAAATAAVIPALSSSSASTPASTEREMRIDGAITPTSSRKQPRRRS
IFTSRKVNLDGERRNDVGKTDIIGSGREIPIKQGFLMKRSSSSLNKEWKKKYVTLCDSGT
LTYHPSLQDYMQNVHGKAIDLLRTTVKVPGKRPPRASSSSMSSLGGVGGGVGGGGGVVSS
PFAQQSAQAGAHAWHAARPHTASGAQPNGAPGGARAPPGAPAPLSSNAFSACPSSLPSTS
ILQQLLGSSAGHRVSPAGVQAAFGACSSTPSSPVSIGAAGAPAPPSCYFPAPCQPGGGGS
NGVHSRSASSNSCCASGGAGFGAADLGRELGGVHISGNGGVPSERSASTTSLAMHQRSAS
LCSSEHWIDGGAFDDSAVDSSHFSPGSPTGRRDVPPSPHAARRKGRWNKTVRNGRPEGST
NSEDPEETFEFVLVSLSGQTWHFEAPSWEERDAWVQAIEGRILASLQSCDSRKTKTRLGS
QGSAVAAQNIRDVQGNDVCIDCGAPNPDWASLNLGALICIECSGIHRNLGSHVSRVRSLD
LDEWPDELAQVMVSVGNAMSRGVWEGSLAGHAKPGPRSSREEKERWIRAKYEQRLFLAPI
PYADASLGQTLCRAVRAGDLRFVVLLLAHGTRSDVNEPEEDGDDDDDNDDEGGGGTAGSV
RRRGGDSMACTALHLSCALPDVVITQLLVWYGADVLARDALGRTPMTYARQARCQECADV
LAQHGSPTDHEPGRYPPPRLALSPPRGAGGAFLANHAKQPSGGPGSRQGFAAPRLGNG
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgatggacccgcacgactccccagtgccgggtcgcaggggcgagtttcagaggaggacc
gtgtgccgcatctccgtgactctggtcagaaaagagccgctggcgctcaaggaggacggc
tcggtgcccgccggcgagtttgccccagcggccaaaggtcgtgacgttgcgagcgccctt
aacggagattgcgccggccgagaaggggcgcgtgccggcagctacgagagcctgactcgg
agtggcctggccatgggacgccgaggagccagcgggaaagcgtacggcgatgggcggttc
gacaccaaggtcctcccgtccaacgcggccctccagcgcgcgccggcggacaatttcaaa
cgtggagtgatgctcgccgagatggaggtgcacaataggccctccaagggcaatgaccct
gccagtctggacggcgctgctggatcaccggtagggagtgctgctggtgctgcccccggg
aagagcggcagggacggcgccgatgctcagccgtggcgcccggcgatggcgccagagcag
aggaagcgcgctcacaccgtcagctgcatcacgggccgcgtggacgtgccaccgcccagc
ccgagggccctgcatcagacagtgtggcgccgaaacccggagctcgtgttcctgctcggc
gagagggcccgcaggagcgcgcggctgctgcaggaagagcgggccaaccgctgcctccct
cctggtcgggatgggttggaaccggggctgggggagcagggcttcctgtccacgtctgat
gccactggtcattgcccacccgcctggcatgaacctcatgaaaaagagaaacattttcag
aaaaaaaatgatttacctgtggattctacttcgtcctccccagcacatgcatttctcaaa
gtggaacagaagccacatatggaggctgttaaaccggccacccatgaaggtgatgcaaat
caatcggtaacgttccagccagatgcttgtaacccccgagtaaagccgtgtaacaaagcc
acgtcggaggaggactatgaagggagctccagtgcatccactcgctcaggacgcctgtgc
gtggaggccgagcggcagacaactccacaggtgcacagcggcggtgtgggcaatgtcatc
gatgccagcgcaggggaccaagtccagaacagtgaggcagagatggtggtggcacatcac
agggctcgatcgcacagctgcgcaatggcgactgccgctgaggccctcgctcgtaggaga
ttccagccggagctgacggacgtgccggaagtggcagcgagcagacaagctcgcccggcc
ctgcggaagagaagcctgagccttggccaaaaattccgagagctgtcgctcgggaggaaa
ctctcgagcatacgcggccgagggggcggcccgtcgacggacgatgaaaaagagagcggt
gctccgggtggcggtggcagaaacctgtcgatcgagccaaaggatggggagatgaacggt
gagcgcggtgggcgcgtggtccggagtccgcgcagagataaaccggtggcggaggagagc
cgggtgaagaggctgctgagcggcgcgttcatcaagaagagggacgtggtctccgcatcc
ccatcgcgaggggtcctcgccggcagctgggagctgctgcccggggccccgcaaggcggc
gctcacgccagcgacgactcgttcgtaaacagccaggagtggaccctgtgccgtggcgtg
ccggagttgcatgtggggattgtgggaaaccttggctgtggcaagtcagcgctggtgcat
cgctttctgacaggcgcgtacgtgcgggaggagtctccggaagggggacgcttcaagaag
gagatggtggcagatggccaaagcctcctgctcttaatccgggacgagggcgcaccgccg
acagagcagtttgcgtcctggctggacggcgtgatgctggtgttcgcgctgtccgacgag
acgagcttccagagcgtggcgcgctaccaccagcagctgtcgtcgctctgcagcctctcg
gagctgcccacgctgctcgtggggacacaggacgcgattgggccgggcagcccacgcacc
gtcgaggatgcccgcgcgaggaggctgtgctccgagctgcgcattggcacctactacgag
acgtgcgccacctatggcctcaacgtggagcgcgtcttccaggaagtggcccagaggatc
gtggccacgcggaagaagcagcagctgtccatcggactgtgcaagcctatggtgacgtca
ccctccgcgcctgtcgttccgtcgtcccccatggggcccctgtccccgcaccctgcgcag
ccgtctgcgctgcacggaggcctttactcacagacgcacgtggcggcggcggcaacagcc
gcggtcattcctgcgctgtcgtcatcgtctgcttccacgccggccagcactgaacgggaa
atgcggattgacggcgccatcacccccacgtcgtcgcgcaagcagccgcggcgtcgatcc
atcttcacgtcccggaaggtgaacctggatggcgaaaggaggaatgacgtcgggaaaacg
gacatcattgggagcggcagggagattcccattaaacagggtttcctgatgaagaggagc
agcagttctctcaataaggagtggaagaaaaaatatgtgacactctgcgacagtggcacc
ctcacctaccaccccagcctgcaggactacatgcagaacgtgcacggcaaggccatcgac
ctcctgcggacgacggtgaaggttccgggcaagcggccgccccgcgcttcctcctccagc
atgagcagcctggggggcgtcggcggcggcgtcggcggcggcggcggcgtcgtctcctcg
ccgttcgcgcagcagtcggcgcaggccggcgcgcacgcttggcacgccgcccgccctcac
accgcctccggtgcgcagcccaacggcgcgccggggggcgcgcgggcgccccccggcgcg
cccgcgccgctgtcctccaacgccttttccgcgtgcccctcgtccctgccgtcgacgtcc
atcctgcagcagctgctgggctcgagcgcgggccaccgcgtgtcgcccgccggcgtgcag
gccgcgttcggggcctgctcgtcgacgccctcgtcgcccgtgtcgatcggcgcggcggga
gcccccgcgccgccctcctgctacttcccggcgccgtgccagccaggcggaggcggcagc
aacggcgtgcactcgcgtagcgccagcagcaactcgtgctgcgcgagcggcggcgctggc
ttcggcgccgcggacctcggccgggagcttggcggcgtgcacatctctggcaatggagga
gtgccgtctgagcgctctgccagcaccaccagcctcgccatgcaccagcgctctgcttcg
ctctgcagctccgagcactggattgacggcggcgccttcgacgacagcgctgtggactcg
tcacacttcagcccgggctccccgacgggccggcgcgacgttcccccgtcgccgcacgcc
gcccgcaggaagggtcgctggaacaagacggtgcggaacggccgtccggaaggcagcacc
aacagcgaagatccagaggagacgtttgagtttgtgctggtgtcgctgtcgggacaaact
tggcactttgaggcccccagctgggaggagcgagacgcctgggttcaggccatcgaaggc
cgcatcctcgccagcctgcagtcctgtgacagccgcaagacgaagacgcggctggggagc
caaggcagtgcggtggcagcgcagaacatccgcgacgtgcaagggaacgacgtctgcatc
gactgcggtgcccccaaccccgactgggcgagcctcaacctgggcgccctcatctgcatc
gaatgctcgggcatccaccgcaacctgggctcgcacgtatcgcgcgttcgctcgctcgac
ctggacgagtggcccgacgagctggcgcaggtcatggtgtcggtggggaacgccatgtcg
cgcggcgtgtgggagggctccctcgccggacatgccaagccaggcccgcgcagctcacgg
gaggagaaggagcgctggatccgggccaagtatgagcagcgcctcttcctggcgcccatc
ccctatgcggacgcctcgctgggccagacgctgtgccgcgccgtccgcgccggcgacctg
cgcttcgtcgtgctgttgctagcgcacggcacgcgcagcgacgtcaacgagcccgaggag
gacggcgatgatgacgacgacaacgacgacgagggaggtgggggcaccgccggcagcgtc
cgtcgtcgtggtggtgacagcatggcctgcactgcgcttcacctctcctgcgctctgccc
gacgtcgtcatcacgcagctcctcgtctggtacggagccgacgtcctcgcccgcgacgcg
cttggccgcacgccgatgacgtacgcgcgccaggcccggtgccaggagtgcgccgacgtg
ctcgcgcagcacggctcccccaccgaccacgagccgggccgctacccgccgcccaggttg
gccctctcgccgccacggggggcgggcggcgcgttcctcgccaaccacgccaagcagccg
agcggcggacccggctcccggcaggggttcgccgcacccaggctgggcaacggatga
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integrated database retrieval system
