Petromyzon marinus (sea lamprey): 116938604
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Entry
116938604 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116938604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116938604
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116938604
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116938604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_10
KH_DTX3L
zf-rbx1
zf-RING_6
RING_XB3-XBAT31
SPEF2_D5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
116938604
NCBI-ProteinID:
XP_032801830
UniProt:
A0AAJ7WLC0
LinkDB
All DBs
Position
4:10274844..10284473
Genome browser
AA seq
526 aa
AA seq
DB search
MATGGNESWTAELGLQNAVIISSVKLMTSAHLRNYEIRRRLEDEHERNVCCGVIYPYNDN
ADEALIAFARAKDVDVFIDSNKYPTRKYSENKQKHSQSNLENAGHQAKSASGNYKEVDRA
QDELFKDLQSQTKSSMSNEDTASFSKIHQTPGYVKDSRQSNTELLQASKINSEFVMEIFK
DELEQLKKRHNFNISVKRMPGQISTVHIMLHPNDKNTFLFNDAMEAFTNFFQSKNKNIRH
SIFKITKDLPERQLDDAISTAKKSYPEMLFQKDESLTEVTVVGYVAKVAGDVDQVEKARD
LLYETLYGFSHGSSSKRNKPNAHVTMNSGTIPTAKPNQENNKDKCPICMDDFTCKTSLEK
CKHSFCKECIDQSMKLKSVCPICQTVYGKLEGDQPKDASMKVTTYYKTSLPGYEKYGTIT
INYDIPNGRQGPEHPHPGKLYYGTTRKAYLPDSQEGRHVLSLLQRAFHQRLIFTIGTSST
TGLQDCVTWNDIHHKTSTHGGADSYGYPDRDYLKRVQEELKAKGIF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcaactggagggaatgagtcttggactgccgagttggggctgcagaatgctgtgata
atcagctccgtgaaacttatgacatcagctcatctcaggaactatgaaataagacgacgg
cttgaggatgagcatgaaaggaatgtttgttgtggagttatttacccctacaacgacaat
gcagatgaggctctcattgcctttgccagagccaaagatgtggatgtctttatagacagc
aacaaatatccgacaagaaaatacagtgaaaataaacagaaacattcacaaagtaatctg
gaaaacgcaggccaccaagccaagtcagcatcaggcaactacaaagaggttgatcgggct
caagatgaacttttcaaagatttgcaaagtcaaacaaaaagtagcatgagcaatgaagac
acagcatcattttcgaagatacatcaaacgcctggctatgttaaagactcaagacagtca
aacactgaacttttacaagcttcaaaaattaactctgaatttgttatggaaatatttaaa
gatgaattagagcagctgaaaaaaagacataactttaacataagtgtcaaacgaatgcct
ggtcaaattagtacagtgcatataatgttgcatccaaatgacaagaacacatttttgttt
aatgacgctatggaagcttttacaaatttttttcaaagcaaaaataaaaacattcgacac
agcatatttaagatcacgaaagacttgcctgaaagacaacttgatgatgccatttcgact
gcgaaaaaatcatatccagaaatgctcttccaaaaggatgaaagcctgaccgaagtgact
gttgtaggatatgtagcaaaggttgcaggagatgtagaccaggttgagaaagcacgggat
ctgctgtatgaaacattatatggttttagtcatggatcctcatcaaaaagaaataaacct
aatgctcacgtgaccatgaattctggcacgatccccactgcaaaaccaaaccaagaaaac
aataaagacaaatgcccaatatgtatggatgatttcacatgtaaaacatccctggaaaaa
tgtaagcactctttctgcaaggaatgcattgatcagtcaatgaagttaaagtcagtatgt
ccaatttgccagacagtttatggcaaactagaaggtgatcaaccaaaggatgcctcaatg
aaggtaacgacttactacaaaacttctttgccaggatatgagaagtatggaaccattaca
ataaactatgacatcccaaatggcagacaggggccagagcacccacatcctgggaagctt
tattatggaacaacaagaaaagcatatttacctgattcgcaagaggggaggcatgtactc
agcctcctccagcgggcatttcatcagaggctcatcttcactattgggacatcgtcaacc
accgggctgcaggactgtgtcacgtggaatgacatccaccataaaactagcacacatgga
ggagctgacagctatggatatccagatcgtgattacctgaagcgtgtacaggaggagctg
aaagccaagggcattttttga
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