Petromyzon marinus (sea lamprey): 116938614
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Entry
116938614 CDS
T09614
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116938614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116938614
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116938614
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116938614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_10
zf-C3HC4_4
zf-Nse
zf-RING_4
Prok-RING_4
zf-P11
zf-RING_6
zf-RING_11
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
116938614
NCBI-ProteinID:
XP_032801847
UniProt:
A0AAJ7WLG8
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Position
4:complement(10452708..10456132)
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AA seq
380 aa
AA seq
DB search
MAAGFSLSSHLIEHLDRDIVEFMFEKMDEAFDHLNKKHGVTFKISDGILNSLCNITLEPF
DKVANQVFVALYEKALLKLQAAHISWSSINLPKGHHLLYQADAFIKQTFPHVYQIKDDMG
VRFVGKGNLPKLAVEEFRKIVHSQQVHSHSLKRSQRRGDDNGRKSLNSVASSKDERERNK
TKEANEEQESRSENERGDECPICLTHFKEKHILPKCRHAFCRSCIDMAVRVRPACPMCNE
PYGNTLGNQPINATMTVNKTSDRLPGYRTCGRIEISYTIPHGVQGPEHPQPGKAYRGMSQ
TAYLPDNQEGNHVLLLLQKAFKQRLTFTVGVSRSTGVDNFVTWNGIEHKTSIYGGPFIYG
YPDPDYLKRVQDDLKDKGIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggtttcagtctgtctagccacttgattgaacatttagatagagatattgtg
gaattcatgttcgagaagatggatgaggcttttgatcatctgaataagaagcacggtgtc
acgtttaaaattagtgatggcatacttaattcactgtgcaacattactctggagcccttc
gataaagtggcgaaccaagtattcgtggcactgtatgaaaaagcgcttcttaagctgcag
gcagcacatatttcttggagtagcattaatctgcctaagggacaccatttgctgtatcaa
gctgacgcattcattaaacaaacatttcctcatgtttaccaaattaaagatgacatgggt
gtccgctttgttggcaaaggaaatcttccaaaattagccgtggaagagttccgaaagatt
gtgcattcccaacaggtacacagtcattcactgaaaagatcgcagcgtagaggtgatgac
aatggccggaagagtttaaactctgtagcaagcagtaaagacgaaagagaaaggaacaaa
accaaagaagccaatgaggaacaggaatccagaagtgaaaatgagaggggagacgagtgt
cccatctgtttaacacattttaaagaaaagcatatattgccaaaatgcagacatgccttt
tgccgcagttgcatagatatggctgttagggttcggcctgcttgccctatgtgcaacgag
ccatatggaaatactttaggcaaccaacccataaatgcaaccatgactgtcaacaaaaca
tcagaccgccttccaggctatcgaacctgtgggaggattgaaataagttacacaattcca
catggagttcaagggcccgagcacccgcagccaggaaaggcttatcgtggcatgtcacag
actgcatatctgccagacaatcaggaaggaaaccacgtactgctcctgttgcaaaaagcc
ttcaaacagaggctcaccttcactgtaggtgtatcacgtagcactggcgtcgacaacttc
gtcacttggaatggcatcgaacacaagaccagcatttacggtggacctttcatctatggc
tatcctgacccagattacctgaagcgtgtccaagatgacctgaaggataagggtattgtg
tga
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