Petromyzon marinus (sea lamprey): 116938624
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Entry
116938624 CDS
T09614
Symbol
CCDC47
Name
(RefSeq) coiled-coil domain-containing protein 47 isoform X1
KO
K24962
PAT complex subunit CCDC47
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmrn03110
]
116938624 (CCDC47)
04131 Membrane trafficking [BR:
pmrn04131
]
116938624 (CCDC47)
Chaperones and folding catalysts [BR:
pmrn03110
]
Other chaperones and cochaperones
Others
116938624 (CCDC47)
Membrane trafficking [BR:
pmrn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
116938624 (CCDC47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
116938624
NCBI-ProteinID:
XP_032801873
UniProt:
A0AAJ7SNR4
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Position
4:complement(10806025..10819433)
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AA seq
592 aa
AA seq
DB search
MGEEEEEEKNTTRGSLSASLYACIPTSLASRLPISLPASLPPSCLGSLSPCLPTSAMRMG
TLLALAVPLAVLLLLLGSRPASGSLHFQYGHNDDDGGRDRDEDDFAEFEEFGEDEDEDGF
FPESGGKRTPAPPIKSHAPWEDARPSTERAARPTGAVDDDEDDGGEVSDEDDEVNGEAAD
DFEDSDNPDEDDVEQFDEEEFEGIRDKSGGKKHSIDTPIRILVVPDHLQNGWECYYLEIL
MVTGLLAYIVNYMIGRNKNSRLAQAWFNSHRELLEANFSLVGDDGTAKEVMSTGALNQEN
EHVYSLWCSGRVCCEGMLVQLKFLKRQDLLNVLARMMRPTSDQVNIKVTMTIDDMDSMVF
AVGTKKAVSRLHKEMQDLSLYCTDKPKPLGRYGLPDSLVVLSESSEITDCLLDLKMISFL
KAHAETIESIHMSDQYSGPKVPQEESQPIKLPDAKKCLLFTFNVPGAGHTSPRDMEGMLG
LMKMVIYCMDKMKRFRLGKEAKQKAERNRTRVEENFLKLTHVQRQEAAQSRREEKKRAEK
ERIMNEEDPERQRKLEVPCVPSVFLWEVQIRREQKKKEKKQMKMKQIKVKAM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagaagaagaagaaaaaaacacaacccgcggaagtctatctgcctccctg
tatgcctgcatcccaacttctctggcttcccgtctccccatctccctccctgcctctcta
cctccatcttgcctaggctccctgtctccctgcctccccaccagtgccatgcggatgggc
actctgctggcgctagctgtgccgcttgctgtcctgttgcttcttctcgggagccgcccg
gcaagtggaagcctgcactttcagtacggccacaacgatgacgatggcggccgtgacaga
gatgaggacgactttgcggagtttgaagaatttggtgaggacgaggacgaggatggcttc
ttcccggagtctggggggaaacgtaccccagcaccccccatcaagagccacgcgccgtgg
gaggacgcacggccaagcacggagagggcagcccgcccgacaggggccgttgatgatgac
gaggacgatggcggagaggtctcggatgaggacgatgaagtgaacggagaggctgcggat
gattttgaagattccgataatcctgacgaggatgatgttgaacagtttgacgaggaggag
tttgaagggatcagggacaagtctggcgggaagaagcacagcattgacactccgattcgc
attttagtggtgccagaccatttgcagaacggatgggagtgctattacctggagatcctc
atggtcacggggctgctagcctacatcgtgaactacatgatcggccgcaataagaacagc
cgccttgcccaggcctggttcaactcgcaccgcgagctgctggaggcaaacttcagcctc
gtgggtgacgatggcacagccaaggaagtgatgagcactggtgcgctgaaccaggagaac
gagcacgtgtacagtctgtggtgctcgggtcgcgtgtgctgcgagggcatgctggtgcaa
ctcaagttcctcaagcgtcaggatctgctgaacgtgctggctcgcatgatgaggcccacc
tcagatcaagtgaacatcaaggtaacaatgaccatcgatgacatggacagcatggtgttt
gctgtggggacgaagaaggctgtcagccggctacacaaggagatgcaggacctgagcttg
tactgcacggacaaacccaagcctctgggccgctacgggctgcctgactcactggtggtg
ctcagcgaaagttctgagattactgactgccttttggacctcaagatgatcagctttctg
aaggcgcatgccgaaaccatcgagtccatacacatgtccgaccagtactcagggcccaag
gtcccccaggaggagagccagcccataaagctccctgatgcaaaaaagtgtttgctgttt
acatttaatgtgcctggagcaggccatacatccccgcgagacatggagggcatgctgggt
ctcatgaagatggtcatctactgcatggacaagatgaaaaggttccggctcggcaaagag
gccaagcagaaggcagagcgcaaccgaacgcgcgtggaggagaacttcctgaagctgacg
cacgtgcagagacaggaggcggcgcagagccggcgcgaggagaagaagcgcgccgagaag
gagcgcatcatgaacgaggaggaccccgagcgtcagcgcaagctggaggtgccgtgcgtg
ccgagcgtgttcctatgggaggtgcagattcgccgtgagcaaaagaagaaggagaagaag
cagatgaagatgaagcagatcaaagtgaaggccatgtga
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