Petromyzon marinus (sea lamprey): 116938671
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Entry
116938671 CDS
T09614
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03266
Virion - Herpesvirus
pmrn04081
Hormone signaling
pmrn04145
Phagosome
pmrn04148
Efferocytosis
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
pmrn04810
Regulation of actin cytoskeleton
pmrn04820
Cytoskeleton in muscle cells
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116938671
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116938671
04512 ECM-receptor interaction
116938671
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116938671
04148 Efferocytosis
116938671
09144 Cellular community - eukaryotes
04510 Focal adhesion
116938671
09142 Cell motility
04820 Cytoskeleton in muscle cells
116938671
04810 Regulation of actin cytoskeleton
116938671
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116938671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116938671
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116938671
04515 Cell adhesion molecules [BR:
pmrn04515
]
116938671
04090 CD molecules [BR:
pmrn04090
]
116938671
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116938671
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116938671
Cell adhesion molecules [BR:
pmrn04515
]
Integrins
Integrin beta subunits
116938671
CD molecules [BR:
pmrn04090
]
Proteins
116938671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
116938671
NCBI-ProteinID:
XP_032802005
UniProt:
A0AAJ7SNN6
LinkDB
All DBs
Position
4:13146302..13164796
Genome browser
AA seq
810 aa
AA seq
DB search
MEPADRWSACKVALAALLLLCAVGAGTGSNNVCISGHAHLCRECLLLHPDCAWCAMKEYP
SGNSRCDLLANLVENGCPQESLEKSSSHVRVEQSNPLSDTGSGSDKQITQLTPQKITLTM
MTGAPAKFQLKVRQVEDYPVDLYYLMDLSMSMRDDLDTIRNLGTDLSREMAKLTSNFRLG
FGSFIDKPVSPFVQMFTDPEHAKNPCQLRTKPPFSCPSTYGYHHVLPLTNEVNKFNEEVQ
KQEVSPNRDAPEGGMDAILQATVCKEQIGWRREASHLLVFTTDDHSHFALDGRLAGIVQP
SDGLCHLDSSNVYVMTDSMDYPSIALVSEKLSENNINLIFAVTKEFKEIYTNYTELIPGT
TVEVLTANSNNIIQLIVSSYKSLRSKVELEVWDQPEELSVSFSAICQDGNPQPGQKKCTD
LNVGDTASFDITVEARGCPSQPVERMLKIKPVGFKDALEVRVLLSCGCACEKSATSNSTE
CNEQGKSECGVCLCQEGRLGSTCECSAEGPVDGSSGGSANATGGDSGPLLCGPLLPNQPV
CGGRGECVCGVCVCYTSEYGKIYGKQCECDSFSCGRHRDQLCGGHGDCNCGECRCHVDWS
GDLCNCTTRMDSCESSDGLLCSGRGDCTCGRCMCTTAGSSGDTCERCLTCTDVCTTRRPC
VECKIYKVGKYANETDCFKFCKIPITSVDTLGNDSSAISCSYKDENDCDVQFTYMEDTFG
KSSIAVLNHLVCPAGPNMLAVILGVAAGILLIGLAMLLIWKLLISMHDRREFARFEEEKL
HARWDSGQNPLYKNTVTTFKNVAYKGTGAE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggagccagctgacaggtggagcgcttgcaaagtggccctcgctgccttgctgcttctc
tgcgcagtcggcgctgggacaggctcaaacaatgtctgcatcagtggccacgcacacctg
tgtcgagaatgcctcctgctgcatccggactgtgcatggtgcgcaatgaaggagtacccg
agtgggaactcgcggtgcgacctgctggccaacttggtggagaacggatgcccacaggag
tccctggagaagtcctctagccacgtgcgtgtggagcagagcaatccactcagcgacacg
ggatcaggttcagacaagcaaatcacgcagctcacgccacagaaaatcaccctcaccatg
atgacaggcgctccagccaaattccaactcaaagttcgtcaggtggaggactacccagtg
gacctctactacctcatggacctctccatgtcgatgcgcgatgacctggacaccatccgc
aacctgggcaccgacctctctcgagaaatggccaagctgacgagcaacttccgcttgggc
ttcggctccttcatcgacaagcctgtgtcaccgtttgtccaaatgttcacagaccccgag
cacgccaaaaacccctgccaattgcgcaccaagccacccttcagctgcccatcgacatat
ggctaccaccatgtgctcccactcaccaacgaagtcaacaagtttaacgaggaggtgcag
aaacaggaggtgtcccccaacagggatgccccggagggtggcatggatgccattttgcag
gctacggtctgcaaggaacaaatcggctggcggagggaggcctcccacctgctggtgttc
accacggacgaccattcccacttcgctctggatggtcggctggctggaatcgtccagccc
agcgatgggctctgccatttggactcgagcaatgtctacgtaatgacagactctatggat
tacccatcaattgccttggttagtgagaagctgtcagaaaacaacatcaacctgattttt
gccgtgaccaaggaatttaaagagatttacacgaactacactgagttgatcccaggaaca
acggtcgaggttttgacagccaactccaacaacatcattcagctgatcgtcagttcgtac
aaaagcctgcgctccaaggtggagctggaggtgtgggatcagccagaggagctgtctgtc
tccttctccgccatctgccaggatggaaacccccagcccggacagaagaagtgcactgac
ctcaacgtgggggacacggcgagcttcgatatcacagtggaggcacgcggatgcccgtcg
cagccggtggagaggatgctgaagataaagcccgtgggtttcaaggacgctctggaagtt
cgcgtgctgctgagctgcggctgcgcgtgtgagaaaagcgcgacgtccaacagcacagag
tgcaatgagcaagggaagtccgagtgcggcgtgtgcctctgccaggagggccgcttgggc
tccacgtgcgagtgcagcgcagaagggcccgtggacggctcgagcggtggcagcgccaac
gcaaccgggggtgacagcggccccctcttgtgtggccccttgctgccaaaccagcccgtg
tgcggaggccgtggagaatgcgtgtgcggcgtttgcgtttgctacacgagcgagtacggg
aagatttacggcaagcagtgcgaatgcgacagtttctcttgcggacgccaccgagatcag
ctttgtggaggccatggggactgcaactgtggtgagtgccgctgccacgtggactggtcg
ggcgacctctgcaactgcacgacgcgcatggactcgtgcgagtcgtcagacgggctcctg
tgcagcggacgcggcgactgcacgtgcggacgctgcatgtgcaccacggccggcagctca
ggcgacacttgcgagcgctgcctcacctgcactgacgtgtgcacgacccgcaggccatgt
gtggagtgcaagatctacaaagttggaaagtatgcaaatgagacggactgcttcaaattc
tgcaagattcccatcacatcagtcgacactctgggcaacgacagttcagctatatcgtgc
agctacaaggatgaaaatgattgcgatgtacaattcacctacatggaagacacctttgga
aagtcatccattgccgtcttaaaccatttagtgtgtcccgcggggcccaacatgctggcg
gttattctgggggtagccgccggcatcctgctgatcgggctggccatgctgcttatctgg
aagttgctcatcagcatgcacgaccgtcgcgagtttgcgcgcttcgaggaggagaagctg
cacgcgcgctgggactcgggccaaaacccgctgtacaagaacaccgtcacaacattcaag
aacgtggcgtacaaggggacaggcgcagaatga
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