KEGG   Petromyzon marinus (sea lamprey): 116938671
Entry
116938671         CDS       T09614                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03266  Virion - Herpesvirus
pmrn04081  Hormone signaling
pmrn04145  Phagosome
pmrn04148  Efferocytosis
pmrn04510  Focal adhesion
pmrn04512  ECM-receptor interaction
pmrn04810  Regulation of actin cytoskeleton
pmrn04820  Cytoskeleton in muscle cells
pmrn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    116938671
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    116938671
   04512 ECM-receptor interaction
    116938671
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116938671
   04148 Efferocytosis
    116938671
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116938671
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116938671
   04810 Regulation of actin cytoskeleton
    116938671
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116938671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116938671
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmrn04147]
    116938671
   04515 Cell adhesion molecules [BR:pmrn04515]
    116938671
   04090 CD molecules [BR:pmrn04090]
    116938671
Membrane trafficking [BR:pmrn04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    116938671
Exosome [BR:pmrn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116938671
Cell adhesion molecules [BR:pmrn04515]
 Integrins
  Integrin beta subunits
   116938671
CD molecules [BR:pmrn04090]
 Proteins
  116938671
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin EGF_integrin EGF_2 I-EGF_1
Other DBs
NCBI-GeneID: 116938671
NCBI-ProteinID: XP_032802005
UniProt: A0AAJ7SNN6
LinkDB
Position
4:13146302..13164796
AA seq 810 aa
MEPADRWSACKVALAALLLLCAVGAGTGSNNVCISGHAHLCRECLLLHPDCAWCAMKEYP
SGNSRCDLLANLVENGCPQESLEKSSSHVRVEQSNPLSDTGSGSDKQITQLTPQKITLTM
MTGAPAKFQLKVRQVEDYPVDLYYLMDLSMSMRDDLDTIRNLGTDLSREMAKLTSNFRLG
FGSFIDKPVSPFVQMFTDPEHAKNPCQLRTKPPFSCPSTYGYHHVLPLTNEVNKFNEEVQ
KQEVSPNRDAPEGGMDAILQATVCKEQIGWRREASHLLVFTTDDHSHFALDGRLAGIVQP
SDGLCHLDSSNVYVMTDSMDYPSIALVSEKLSENNINLIFAVTKEFKEIYTNYTELIPGT
TVEVLTANSNNIIQLIVSSYKSLRSKVELEVWDQPEELSVSFSAICQDGNPQPGQKKCTD
LNVGDTASFDITVEARGCPSQPVERMLKIKPVGFKDALEVRVLLSCGCACEKSATSNSTE
CNEQGKSECGVCLCQEGRLGSTCECSAEGPVDGSSGGSANATGGDSGPLLCGPLLPNQPV
CGGRGECVCGVCVCYTSEYGKIYGKQCECDSFSCGRHRDQLCGGHGDCNCGECRCHVDWS
GDLCNCTTRMDSCESSDGLLCSGRGDCTCGRCMCTTAGSSGDTCERCLTCTDVCTTRRPC
VECKIYKVGKYANETDCFKFCKIPITSVDTLGNDSSAISCSYKDENDCDVQFTYMEDTFG
KSSIAVLNHLVCPAGPNMLAVILGVAAGILLIGLAMLLIWKLLISMHDRREFARFEEEKL
HARWDSGQNPLYKNTVTTFKNVAYKGTGAE
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggagccagctgacaggtggagcgcttgcaaagtggccctcgctgccttgctgcttctc
tgcgcagtcggcgctgggacaggctcaaacaatgtctgcatcagtggccacgcacacctg
tgtcgagaatgcctcctgctgcatccggactgtgcatggtgcgcaatgaaggagtacccg
agtgggaactcgcggtgcgacctgctggccaacttggtggagaacggatgcccacaggag
tccctggagaagtcctctagccacgtgcgtgtggagcagagcaatccactcagcgacacg
ggatcaggttcagacaagcaaatcacgcagctcacgccacagaaaatcaccctcaccatg
atgacaggcgctccagccaaattccaactcaaagttcgtcaggtggaggactacccagtg
gacctctactacctcatggacctctccatgtcgatgcgcgatgacctggacaccatccgc
aacctgggcaccgacctctctcgagaaatggccaagctgacgagcaacttccgcttgggc
ttcggctccttcatcgacaagcctgtgtcaccgtttgtccaaatgttcacagaccccgag
cacgccaaaaacccctgccaattgcgcaccaagccacccttcagctgcccatcgacatat
ggctaccaccatgtgctcccactcaccaacgaagtcaacaagtttaacgaggaggtgcag
aaacaggaggtgtcccccaacagggatgccccggagggtggcatggatgccattttgcag
gctacggtctgcaaggaacaaatcggctggcggagggaggcctcccacctgctggtgttc
accacggacgaccattcccacttcgctctggatggtcggctggctggaatcgtccagccc
agcgatgggctctgccatttggactcgagcaatgtctacgtaatgacagactctatggat
tacccatcaattgccttggttagtgagaagctgtcagaaaacaacatcaacctgattttt
gccgtgaccaaggaatttaaagagatttacacgaactacactgagttgatcccaggaaca
acggtcgaggttttgacagccaactccaacaacatcattcagctgatcgtcagttcgtac
aaaagcctgcgctccaaggtggagctggaggtgtgggatcagccagaggagctgtctgtc
tccttctccgccatctgccaggatggaaacccccagcccggacagaagaagtgcactgac
ctcaacgtgggggacacggcgagcttcgatatcacagtggaggcacgcggatgcccgtcg
cagccggtggagaggatgctgaagataaagcccgtgggtttcaaggacgctctggaagtt
cgcgtgctgctgagctgcggctgcgcgtgtgagaaaagcgcgacgtccaacagcacagag
tgcaatgagcaagggaagtccgagtgcggcgtgtgcctctgccaggagggccgcttgggc
tccacgtgcgagtgcagcgcagaagggcccgtggacggctcgagcggtggcagcgccaac
gcaaccgggggtgacagcggccccctcttgtgtggccccttgctgccaaaccagcccgtg
tgcggaggccgtggagaatgcgtgtgcggcgtttgcgtttgctacacgagcgagtacggg
aagatttacggcaagcagtgcgaatgcgacagtttctcttgcggacgccaccgagatcag
ctttgtggaggccatggggactgcaactgtggtgagtgccgctgccacgtggactggtcg
ggcgacctctgcaactgcacgacgcgcatggactcgtgcgagtcgtcagacgggctcctg
tgcagcggacgcggcgactgcacgtgcggacgctgcatgtgcaccacggccggcagctca
ggcgacacttgcgagcgctgcctcacctgcactgacgtgtgcacgacccgcaggccatgt
gtggagtgcaagatctacaaagttggaaagtatgcaaatgagacggactgcttcaaattc
tgcaagattcccatcacatcagtcgacactctgggcaacgacagttcagctatatcgtgc
agctacaaggatgaaaatgattgcgatgtacaattcacctacatggaagacacctttgga
aagtcatccattgccgtcttaaaccatttagtgtgtcccgcggggcccaacatgctggcg
gttattctgggggtagccgccggcatcctgctgatcgggctggccatgctgcttatctgg
aagttgctcatcagcatgcacgaccgtcgcgagtttgcgcgcttcgaggaggagaagctg
cacgcgcgctgggactcgggccaaaacccgctgtacaagaacaccgtcacaacattcaag
aacgtggcgtacaaggggacaggcgcagaatga

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