Petromyzon marinus (sea lamprey): 116938735
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Entry
116938735 CDS
T09614
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116938735
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116938735
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116938735
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116938735
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116938735
Cell adhesion molecules [BR:
pmrn04515
]
Immunoglobulin superfamily
Type II RPTP family
116938735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_2
ig
Ig_DSCAM-DSCAML_C
PTP-SAK
V-set
Tc-R-P
DSPc
Y_phosphatase3
C2-set_2
PTP-NADK
ASTN1_2_fn3
DUF5849
Motif
Other DBs
NCBI-GeneID:
116938735
NCBI-ProteinID:
XP_032802176
UniProt:
A0AAJ7SP06
LinkDB
All DBs
Position
1:21680202..21912918
Genome browser
AA seq
2009 aa
AA seq
DB search
MSRKMGLLERLSLPALLICIPLLLFILGLTDADSPPHFTRTPVDQSGVSSGVAAFVCKTA
GDPRPRITWMKKGKRVSSQRFEVTEFEDGSGSVLRIQPLRTPRDEGEYECTASNGVGVAT
ASATLTVYREDQLPMGFPVIDNGPVLRVVERTRLATMLCVVSGTPDPEITWYKDLLPVDT
GYNQGRIKQLRSESFGSTPIRGALQIENSQDSDQGKYECVATNSVGTRFSAPAKLFVKGL
RKVRTIPPRFTIVPTNQEVVPGGSINITCVAMGSPMPFVKWMLGTQALTPADEMPIGLNM
LQLTDVRSSNNYTCVAMSSLGVIEAVVQVAVKALPRPPGTPLVTETTATSITLTWDSGNV
DPVLHYVLLLKARPGHSNNNNNNDNANNDSSNEEKEDEEEFSNSSGGGGGGGAPSMQEIG
PVTTTRYTVGGLSPYSDYEVRVVAVNGVGRSALSGAARARTGERAPSTAPWGLHGRMVSP
SNALLQWQEPAEPNGQIRGYRVYSAKLTAAGTRGPVVTPPLSSWMKRSVENVPLATLSGL
EEGALYAVRVLAFTNVGDGPLSPEIHIIAQFGVPSQPISFKAEAESDTSMLLSWLPPRQE
NILKYELLYREGDTGPERRLSLDPTVNHVLEGLRENSLYSFRLAGRSLHGLGPYSPTVTA
RTLPTLASGTPRRVEAEAVNASAVMVRWRLPPSTSLSTSSSSSSSPPPLPHPLFRVRWWR
SDSAQGRQETQSPDIIGQWESDDTSEYEFLIGGLQPETSYSLTVRSLLPRGEIAESLPKT
VKTKAAVPSKPHVKVTVMEGTVALVEWEEPEVTFGPLLDYRLTYKRMDAATQASTLYLAV
SESSVTVRNLHRGASYSFVMVARSVGGVSGGSLLGEEAVITVVTPEAPPSAPPLNVSVGR
MGRSAAALHWEPPPLDSRNGVIVRYTVLYRALPIGGVGHREGTGAERAEGSIAGDGRGKG
DYKAGGVSQRGGRGTRGTISEGGRGPASGGERGGHEGGGRGSAGVGRGVPGGPGSGGPGV
GGSGGDSEEGGDVAAESWDGELHVVGDTTAVVLSGLQPNRSYEARVRAHTEAGPGPLSDA
VHFRTLSNEGAGGFAMNFRIKAMMPTSVLLSWEVPDSPGSNERLQIVYRGGHSMEVDAMR
SHQLVVGLEADSLYSFMLNAGPNGGLLQVVSVHTVPQVHWSEPGELIGETGGDANGDMRE
HGLDPTLVPLPQLLGDLRVRMYLIVVVPLYNLEEQPIAWVSPNNMDFEEILDMEATSLHL
TRLQRMSLRASEHQFVAAHMERLQRPFVVARLEHLPPTFPIGDGHSRRLQPGLAYRVCVL
ALLHAPAQQASVYVSSPCSPPVLLEAQPVIGEDEGLVWVVGPVLATIIIIVIVIAILLYK
SKPDRSKREAEVKGCLPAPSKDTGHSGSADPVQMRRLNHQTPGMEMHPPIPVSEFAGHVE
RLKANDNMLFSQEYESIDPGQQFTWDHSNLEINKHKNRYANVVAYDHSRVILHTIDGVPG
SDYINANYIDGYRRHNAYIASQGPLADTVADFWRMVWEQRSSTIVMMTKLEERARVKCDQ
YWPNRGSESYGLVQVTLTDTVELATYSTRSFTLTRSGCTERRDVRQFQFTAWPDHGVPEF
PTPVLAFLRRVRAAWGSSADGGPLIVHCSAGVGRTGCLIVIDAALERVKHEHTVDVYGQV
TCMRAQRNYMVQTEEQYAFVHTALVEAVSSGCTETPARSLHAHLQRLSQSVSHTEPRTTG
LHLEFQRLQMSKLRVSTAPSGALPCNKLKNRLLTVIPPDSSRVALQAIRGTQGSDYINAS
YIDGYRQQRAYIATQGPLPETTEDLWRMLWEQNSTIVVMLTKLREMGREKCHQYWPAERS
ARYQYFVVDPMAEYKMPQYVLREFKVTDARDGQSRTVRQFQFTDWPEQGVPRSGEGFIDF
IGQVHKTKEQFGQEGPITVHCSAGVGRTGVFIALSVVLERMRYEGLLDLFQTVKMMRTQR
PGMVQTEDQYQFCYRAALEYLGSFDHYTV
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtaaaatggggcttttggagaggctgtcgctgcctgcactgctcatctgcata
cctctcctactcttcatcttgggactcacggatgctgacagcccgcctcacttcacacga
accccggtggatcaaagtggagtgtctagcggggtggcggcgtttgtgtgcaagacagca
ggtgatccacggccccgcatcacctggatgaagaagggcaagagggtgagctcacagagg
tttgaggtgacggagtttgaggatggttcaggctccgtgctccggattcagccactgaga
acccctcgcgacgaaggggagtacgagtgtacagcgtccaacggggtcggagtggcaaca
gcctctgccacactcaccgtctacagagaggaccaactaccgatgggctttcctgtaatt
gacaatggccctgtgctgcgtgtggtggagcgtacccgcctggccaccatgctgtgtgtt
gtgagtggaacaccagacccggagatcacgtggtacaaggatttgctgcccgtcgacacc
ggctataaccaaggccgcatcaagcagcttcgctctgagtcttttggcagtactccaata
cgaggggccctacaaattgagaacagccaggattcggaccaaggcaaatacgagtgtgtg
gctacaaacagtgtgggtacacgcttctctgcgccagccaagctcttcgttaaaggactc
cgaaaagtgcgaaccatcccccctcgcttcaccatcgtcccaaccaaccaggaggtggtg
cctggcggtagcatcaacatcacctgtgtggccatgggctcccccatgcccttcgtcaag
tggatgcttggcacgcaggctctgaccccagccgatgagatgcctatcggactgaacatg
ctgcagctcacggacgtgaggagcagcaacaactacacgtgtgtggccatgtcctcgctg
ggagtcatcgaggctgtggtgcaggtagccgtgaaggccttaccacggcctcccgggact
cccctcgtcacggagaccacggccacgagtatcaccctcacgtgggactcgggcaatgtt
gaccctgtgctgcactacgtgctgctactgaaggcccggcccggccacagcaacaacaac
aacaacaatgacaatgccaacaacgacagcagcaatgaggagaaggaggatgaggaggaa
ttcagcaacagcagcggaggaggaggtggtggcggcgctccctccatgcaggagattgga
ccggtgaccacgacgcgatacacggtgggggggctgagcccttactcggactacgaggtg
cgcgtggtggccgtgaatggcgtggggcgcagcgcactgagtggggcggcccgcgcccgc
acaggcgagcgggcgccgtccacggcgccgtggggcctgcacgggcgcatggtgtcgccg
tccaacgcgctgctccagtggcaggagccggccgagcccaacgggcagatccggggatac
cgtgtctactccgccaagctcacggcggcaggcacacggggccccgtggtgacaccaccg
ctgtcgtcgtggatgaagcggagtgtggagaacgtgccgctggccacgttgtcggggctg
gaggagggggctctgtacgccgtgcgggtcctcgctttcaccaacgttggggacgggccc
ctctccccagagatacacatcatcgcacagttcggagtgccgagtcaaccaatcagcttc
aaagcagaggccgagtcggacacaagcatgttactctcatggctgccaccgcgtcaggag
aatatcctgaagtatgagcttctgtacagagagggagacacagggcctgagcgccggctc
tcccttgaccctaccgtgaaccatgtcctggagggcctgagggagaactccctctactca
ttccgtctcgctggacgctccttgcacggcctgggcccctacagccccactgttactgca
cgcacacttcccacacttgcgagcggaactcctcggcgggtggaagccgaggctgtgaac
gcgtcggctgtaatggtgcggtggagattgccaccatcaacatcattatcaacatcgtca
tcgtcgtcgtcatcccctcctccacttccacaccccttgttccgcgtgcgatggtggcgg
tcggattcggcacaaggaagacaggagacccagtcaccggacatcatagggcagtgggag
agtgatgacacatcagaatacgagtttctcattgggggcttgcagcccgagacctcctac
tccttgactgtgaggtccctacttccgcgaggggagattgctgagagcctgccgaagacg
gtcaagacaaaggctgcagttcccagcaaaccccacgtcaaggtgacagtcatggagggc
acagtggcgctggttgagtgggaagagccagaagtgacatttgggcctctcttggactac
agactcacttacaaacgcatggatgcagccactcaagcgtccaccctgtacctcgcggtg
tccgagtctagtgtcactgtgcgcaacctgcatcgcggggcctcctactcgtttgtcatg
gtggcacggagtgtgggcggggtgagcggaggcagtctcttgggcgaggaggcggtgatt
acagtggtaacgcccgaggctccgccgtcagctccgccgttgaacgtgagtgtggggcgc
atgggccgctcggcggccgcgctccattgggagcctccacccctggactctcgcaatgga
gtgatcgtaaggtatacggtgctttaccgagccctgcccattggaggagtaggacatcgt
gagggtacaggagcagagagagcagaaggaagtattgctggagatggaagaggaaaagga
gattacaaagcaggtggagtttctcaacgtggtggaagaggtactagaggtacaatttct
gaaggtggaagaggtcctgcaagtggaggtgaacgaggaggtcatgaaggtggaggaaga
ggttctgcaggagtaggtagaggagttcctgggggtccaggcagtggaggccctggtgtt
ggaggatccggtggagattctgaagaaggaggagatgttgcggcggagtcctgggatggg
gagcttcatgtcgtcggtgataccacagccgtggtgctgagcggcctccagccaaaccgg
agctacgaggcgcgagtgagggcacacaccgaggctgggccggggcccctcagcgatgcc
gtgcactttcggacactctccaatgaaggtgcaggcggatttgccatgaatttccgcatt
aaagccatgatgccgacatcagtcctgctgtcctgggaggtccctgattctccagggtca
aacgaacgactacagatcgtgtacaggggtggccacagcatggaagtggatgcaatgagg
agccaccagctcgtagtcgggctggaggctgattcactctactcattcatgctcaacgca
ggccccaatgggggcctcctgcaggtggtgagtgttcacacggtgccccaagtacattgg
tctgagcctggggagctaattggagaaacgggaggagacgcgaatggtgatatgagggaa
catggactcgacccaacccttgtgcccctgccacagctgctgggagacctcagggttcgc
atgtacctcattgtggtggtgcctctatacaacctggaagagcagcccattgcctgggtc
tccccaaacaacatggactttgaagagatcctggacatggaggcaaccagcctgcatctc
acgcggctgcagcggatgtctctgcgtgccagcgagcaccagttcgtggcggcgcacatg
gagcggctccagcggccatttgtggtggcgcggttggagcatctcccgcccacgttcccg
attggagacgggcacagtcggcgtctgcagccagggctcgcttaccgagtgtgcgtgctg
gcgctgctgcacgcacctgcacagcaggcgagcgtgtatgtgagcagtccgtgctctcca
cctgttcttctggaggcacagcctgtgattggcgaggacgagggtcttgtatgggtggta
ggacccgtactagcgaccatcatcataattgtcatcgtcatcgccatccttctctacaag
agcaagccggacaggtctaagcgggaggctgaggttaaaggctgcctcccggcacccagc
aaagacacagggcacagcggcagtgccgacccagttcaaatgcgtcggcttaaccaccag
acccctggcatggagatgcatccgcctatcccagtgtcagaatttgcgggtcacgtggag
cgactgaaggccaatgacaacatgctcttctcacaggagtatgagtctatagacccaggt
cagcagtttacgtgggaccactccaacttggagatcaacaaacataagaaccgatacgcg
aacgtggtcgcctacgaccactcgcgcgtcattttgcacaccattgacggtgtcccaggc
agtgactacatcaacgccaattacattgacggctaccggaggcacaacgcatacatagca
tcacagggtcccctcgcggacacggtcgcggacttctggaggatggtgtgggagcagcgg
agctccaccatcgtcatgatgacaaagctggaggagcgtgcacgggtgaagtgtgatcag
tattggcccaaccggggctccgagtcatatgggctcgtgcaagtcacactcacggacaca
gtggagctggcaacatacagcacacgctccttcactctcacgcggtctggctgtacggag
cgccgggacgtgcggcaatttcagttcacggcgtggccggaccacggcgttcccgagttc
ccgacccccgtgctcgctttcctgcgccgcgtgcgcgccgcttgggggagctccgctgac
ggaggccccctcatcgtgcactgcagtgcgggtgtgggtcgcacgggctgcctcatcgtc
atcgacgctgcgctcgagagggtgaagcacgaacacacggtcgatgtgtatggacaggtg
acttgcatgcgagcccagcgtaactacatggtgcagacggaggagcagtacgcgtttgtg
cacacggcgctggtggaggcggtgtcgagtggttgcacggagacgcccgcccgctccctg
cacgctcaccttcagcggctgagccagagcgtctcacacacggagccacgcaccacaggg
ctccacctcgagttccagcgcctgcagatgtcgaagctgcgggtgagcacagcgccgtcg
ggggcactgccgtgcaacaagctcaagaatcgcctgctcacagtgatcccgcctgacagc
agccgggtggcgctgcaggcaatccggggcacccagggatctgactacatcaacgccagc
tacatcgatggataccggcagcagagggcctacatcgcaacacaagggccccttccagag
accacagaggacttgtggagaatgctttgggagcaaaattcaacgatcgttgtgatgctg
accaagctgagagagatggggcgggagaagtgtcaccagtactggccagctgaacgctct
gctcgttatcagtattttgtggttgatcccatggccgagtacaagatgcctcaatacgta
ttgagagagtttaaggtcacagatgcaagggacgggcagtctcgcaccgtccgtcagttc
cagttcacggattggccggagcagggcgtgccccggtctggggaggggttcatcgacttc
atagggcaggtgcacaagaccaaggagcagtttggacaggaggggccaataacagtgcac
tgcagtgctggtgtgggccgcacaggcgtcttcatcgccctgagcgtagtgttggagcgc
atgcgttacgaagggctcctcgacctcttccagacagtgaagatgatgaggacacagagg
ccgggcatggtgcagacggaggatcagtaccaattctgttaccgtgctgcccttgaatat
ctgggaagttttgatcactacaccgtgtag
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integrated database retrieval system
