Petromyzon marinus (sea lamprey): 116938814
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Entry
116938814 CDS
T09614
Symbol
ADARB1
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116938814 (ADARB1)
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116938814 (ADARB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
116938814
NCBI-ProteinID:
XP_032802381
UniProt:
A0AAJ7SPG6
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All DBs
Position
4:complement(20890068..20973425)
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AA seq
741 aa
AA seq
DB search
MCSRVSEQLGISSIPTHACERTTAVCQFRAQPNVTGVDENEENMNSCSTDVKENRHVGNN
MSITEPALGLRSIASIPANRGSTKRKKPLEEDSNGSMCPRFRPKKRRRAPGPAVPKNALM
QLNEVKPGLQYRMVNQVGPVHAPVFIMAVEVNGQTFEGSGSTKKKAKLQAAEKALRSFVQ
FPNACEAHIAMGQNTAAITDFTSDLADVPGMNFNKFDLPGESDSFSQDSSESESFLSTFG
LNGFEAKASRSEASLIPAVPSQQPSNPPYPLLSCGKNPLMILNEMRPGLRFDFVAEIGES
HARNFVMAVTVDGQTFQGFGRNKKLAKARAAQAVLQGIFNLQLDATPGRQPIPSEGLQLH
LPQVLADTVASLVQQKFSDLTEGFTSPHARRKVLAGIVMTAGLDVKDAQVISVATGTKCI
NGEYMSDRGLALNDCHAEIVARRALLRYLYTQLELHFSSKEEEKQTSIFVALEQGGFKLK
EDIQFHLYISTSPCGDARIFSPHEASMDGDKHPNRKARGQLRTKIESGEGTIPVRASGAV
QTWDGVLQGERLLTMSCSDKIARWNVLGIQGSLLSHLMKPIYLNSVILGSLYHGEHLSRA
AYQRISDIWDLPSPYKLNRPMLSGISNAESRQAGKAPSFSANWSYGDGSLEVINATTGKN
DLGRASRLSKHALFSRWLRVNRKLNTRIDLKGKRMNVYCEAKLAAEDYQGAKRQLNRAFH
KASLGAWMKKPIEQDQFSLSV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagccgtgtctctgagcagctgggcatatcctcgattcctacgcacgcttgtgaa
aggaccacagctgtttgtcaattcagagcgcaaccaaatgtgactggagtggatgagaat
gaagagaatatgaactcttgcagcaccgacgttaaagagaatcgtcacgtcggaaacaac
atgtccatcacggagcctgctctcggactgcgctccatagccagcattcccgcgaacagg
ggctccacgaaacgcaaaaagcccctggaggaggacagcaatggctctatgtgcccgcgt
tttcggccgaaaaaacgaaggagggcgccggggccggctgtgccaaagaacgccctgatg
cagctcaacgaggtgaagccgggccttcagtacaggatggtgaaccaggtggggcccgtg
cacgcgcccgtcttcatcatggccgtggaggtgaatggtcagaccttcgagggttcgggc
tccacaaagaagaaggcaaagctgcaggcggccgagaaggccctgcgctcgttcgtgcag
tttccgaacgcttgcgaggcccacatagccatgggccagaacaccgcagcgatcaccgac
ttcacgtccgacctggccgacgtcccgggcatgaactttaacaagtttgacctacctggg
gagagtgactctttctctcaagactccagcgagagcgagtctttcctgtctacattcgga
ctcaacggcttcgaggcgaaggcaagcaggagcgaggcgtcgctcattcctgccgtgcct
agccagcagccaagcaacccaccttaccctcttctctcgtgcggaaaaaacccgctgatg
atcctcaatgaaatgcgacctgggctcaggtttgactttgtcgcagaaatcggcgagagc
catgccaggaactttgtaatggctgtgacggtggacgggcagacgtttcagggatttggt
cgcaataagaagctggcaaaggctcgagcagcacaggctgtccttcagggcatatttaat
ctgcagctggatgccacccccggtcgccagcccatcccaagtgagggcctgcagctgcac
ctgccacaggtgctggcagacacggtcgcgtcccttgtgcagcagaagttttcagatctc
accgagggcttcacgtcgccgcacgctcgacggaaagtgctcgctgggatcgtcatgact
gccgggttggacgttaaagatgcgcaggtgatatcagtggccacgggaaccaagtgcata
aacggcgagtacatgagtgaccgtgggctggctctcaacgactgccacgcggagatcgtg
gctcggcgtgccctgctccgctacctctacacccaattggagctccacttcagtagcaag
gaagaggagaagcagacgtccatatttgtagcattggaacagggaggcttcaagctgaag
gaagacatccagtttcacctatacatcagcacatcaccctgtggagatgctcgcatcttt
tctccccatgaagccagcatggatggtgacaagcaccccaacagaaaggcccgcgggcaa
ctgcgtacaaagatcgagtcgggagaggggaccatccctgtgcgggcgagtggcgctgtg
cagacgtgggatggtgtactacaaggagagcgtcttctcaccatgtcctgcagtgacaaa
atcgccaggtggaatgtgctgggcatacagggctccctgctgagccacctgatgaagccc
atctacctgaacagcgttatcctgggcagcctttaccacggcgagcatctgtcgcgcgct
gcataccagaggatctccgacatttgggaccttccttcaccatacaagctcaatcgaccc
atgctcagtggcattagcaacgcagagtcccgtcaggctgggaaggccccaagtttcagt
gcaaactggagctacggcgatggcagtctggaggtgatcaatgccaccacggggaagaat
gacctgggccgtgcatcgcgtctctccaagcatgccttgttttcacgctggctacgagtc
aacagaaagctaaatactcgcattgacctgaaggggaagagaatgaatgtttactgcgaa
gcgaagctggcagctgaggactatcaaggagccaagcgccagctcaaccgggccttccac
aaggctagcctaggagcctggatgaagaagcccattgagcaagatcagttctcgctctct
gtgtga
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