Petromyzon marinus (sea lamprey): 116938831
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Entry
116938831 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116938831
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116938831
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
HECT type E3
116938831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
116938831
NCBI-ProteinID:
XP_032802417
UniProt:
A0AAJ7WM09
LinkDB
All DBs
Position
4:22894262..23097664
Genome browser
AA seq
1776 aa
AA seq
DB search
MNSVQTILIQNLSRNRAPDMAVSARDPSCAGRRRCDSQARYSLNPESLRGLSGGGSAAGL
VSDGRRGLSPEGGRAGVSLSAAGPLSPGELHPGLGEPGSGGVVRANSDTDLLSSDSRSSL
TASSCDYSVGQARPLVISWDIKEEVDATDWIGLYSIDETSPGNFWDSKNRGVNGTQKGQI
VWRIEPRPYFTESETKICFKYYHGVSGALRAVTPCITIRNPNPTASLDGTSEDDEPGQHT
RRLISFSLSELRATALKKGMFFNPDPYLKISIHPGKRSTFPTLPHHGQERRSGIVTNTTN
PAWQGEGYSFVALPTDMLEIEVKDKFAKSRPIIRRFLGKLGIPVQRLLERHAIGDQVLSY
NLTRRMPTDHVSGQLQFRFEITSSMHPDASPDSAGAYIGVSATNGDVTSPSDDEEQTQTS
GGTLGAAQRSYANGAVQRGLEEARPHDDVFAEDASVAAWAGEGALEEADAAAAAAAASAA
EAASNRHGSLNDYLDSLVEGQAAAAAQRQGHRVTPAVALSSSFPTNSRLNTILYIDSDCE
SPGTHPGEQRVPQLVRSEAGFPEGLSNRTGDAGARTRSSLSPLGEARPAAEMRPLSLVVS
ELESVEASVLEMRQPTTPRTHYVALHRLLYSLPSTRLTGGDDGDGDGGGGGDGGNGDPRG
RHAAAVGGGTRPDDDNGGVRDGSPGSEGADGAERTLEDNRAVLGAGDEEVGPIGVRRPER
SPDWDEARPECPAGAERSAAERLGSGDGAEERRGSAVVAFDGTADPDVPVCNVLGTESVA
EPSPGRMVSDGGGSREEEAPEEHEAGGAGSPLAEAAASDVETGGRTPEGVVNRGDAACPA
CSATRVSSLDSGTTTCVSSFDSARLSESTAFSSQDEDEASVDAATDGTAEGSRTQGAGGR
ACCGACGGMATAAGVPERGEADGRGPDNEEAIWQRRHSLQAATQEAEADEVARALPATAC
PSADEPPSRESSHPPLCQLPSIRQDMSRYQRVDEPLPANWEARIDSHGRVFYVDHVNRMT
TWQRPTASSSPQVLQRSNSIHAVQQMEQLNRRYQSVRRTMTSDRSAAEEEGGAVGGASSD
GAPGPGEEEEPDAAPPISDQQRRDSAPAGHHMMHTRMSLLLQSPAVKFLSCPDFFTLLHS
NPSAYHLFANSTCLKHMISKVRRDSHNFERYQHNRDLVAFLNTFSNKQLELPRGWEMKYD
HQGKPFFVDHNARTTTFIDPRLPVQSARPPGPIAHRRHLQRQRSHSASEVGDDQRHHGPP
VTPRPANTLSVSGRYPYHDSMPIAYNDKIVAFLRQPNAFEILQERQPGLSRHPSLREKIQ
FVRSEGTSGLERLSGDADLVILLSLFEDEIMSFIPPHSLLHPSYTQSPRSSPGSSPQNSP
GSQRANARAPAPYKRDFEAKLRNFYRKLESKGYGQGPGKIKLVIRRDHLLEDAFNQVMAH
SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM
SAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRTPCDLSDLEYLDEEFHQS
LQWMKDNDITDILDLTFTVNEEVFGQITERELRPGGAHMAVTEKNKKEYIERMVKWRVER
GVVQQTESLVRGFYEVVDARLVSVFDARELELVIAGTAEIDLLDWRTNTEYRGGYHDSHI
VMRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFAALRGSNGPRKFCIEKWGRITSLPR
AHTCFNRLDLPPYPSYAMLYEKLLTAVEETSTFGLE
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtccagaccatcctcattcagaacctgtcacggaatagagcccccgacatg
gccgtgtcggcgagggacccgtcgtgtgccgggcgccggcggtgcgactcgcaggcccgg
tacagcctcaaccccgagagcctgcgtggcctttccggaggtggcagcgctgcgggcctc
gtgtcggatggccggcggggcctgtcccccgagggtggccgtgcgggcgtctcgttgtcc
gcggccgggcccctgtcgccgggggagctgcacccgggcctgggcgaaccgggctccggc
ggcgtggtccgtgccaacagcgacacggacctgctgagctccgactcccgctccagcctc
acggcgagcagctgcgactactcggtggggcaggccaggcccctcgtcatctcgtgggac
atcaaggaggaggtggacgccaccgactggatcggcctctacagcatcgacgagacgtct
ccgggcaacttctgggactcaaagaaccgcggcgtgaatggcacccagaagggccagatt
gtgtggcgcatcgagccacggccgtacttcaccgagtcggagaccaagatctgcttcaag
tattaccacggagtgagcggggcgctgcgcgcggtcaccccgtgcatcaccatccgcaat
cccaaccctacggccagcctggatgggacgagcgaggacgatgagccaggccagcacacg
cgtcggctcatcagcttctccctctctgagctgcgtgcgacggcgctcaagaaagggatg
ttctttaacccggacccgtacctcaagatctcgatccaccccggcaagcgcagcaccttc
cctacactgccacaccacggccaggagcgccgctccggcatcgtcaccaacaccaccaac
cccgcgtggcagggcgagggttacagcttcgtggctctccccaccgacatgctggagatt
gaggtgaaggacaagtttgccaagagccgacccatcatccgccgcttcctcggcaaactg
ggcatccctgtgcagaggctgctcgagagacacgccatcggtgatcaggtgctgagctac
aatctgacgcgaaggatgcccaccgaccacgtgagcggccagctgcagttccgcttcgag
atcacttcctccatgcacccagacgcatcgcccgactcggcgggggcctacatcggcgtg
tcggccacgaacggcgacgtgaccagcccctcggacgacgaagagcagacccagacgagc
ggcggcaccctgggagccgcccagaggtcctacgctaacggcgccgtgcagagggggctg
gaggaagcacgcccgcacgacgacgtgttcgccgaggacgccagcgtggccgcgtgggcc
ggcgaaggggccttggaggaggcggacgcggccgccgccgcggccgctgcgtctgccgcc
gaagctgcctccaacaggcacggctccctcaacgattacctggactccttggtggagggg
caggcagcggccgccgctcagcgccagggccaccgcgtgacgcccgccgtggccctcagc
agcagtttcccaacaaacagcaggctgaacacgatcctgtacatcgactcggactgcgag
agtcccggcacgcaccccggcgagcagagggtgccccagctggtgaggagcgaggcgggc
ttccccgagggtctgtcgaaccggaccggggacgcgggggcgcggacgcgctcgtcgctc
tccccgttgggggaggctcggcccgcggcggagatgcggcccttgtcgctggtcgtgtca
gagctggagagcgtggaggcctcggtgctggagatgcgccagccgaccaccccgcgcacc
cactacgtggcgctgcaccgcctgctctacagcctgccgtccacgcgcctcacgggcggc
gacgacggcgacggcgacggcggcggcggcggtgacggcggcaacggcgacccgcggggc
cggcacgcggccgcggttggaggtggcactaggccggacgacgacaatggcggcgtccgc
gacgggtccccgggatcggaaggggccgacggcgcggagcgaacgttggaagacaacaga
gctgtgctgggtgccggcgacgaggaagtgggccctattggggtgcggcggcccgagcga
agcccagattgggacgaggcgagaccagagtgccccgccggagccgagcggagcgccgcg
gagaggctcgggagcggagacggcgccgaggagcggagaggctccgccgtggtggcgttt
gacgggacggccgatccggacgtccccgtctgcaacgtgttgggaaccgagagcgtagcg
gaaccgagcccgggccgcatggtctcggacgggggcggctcccgagaggaggaggccccc
gaggagcacgaagcgggtggggcagggagtcccctcgcggaggcggccgcgtcggacgtg
gagacgggaggccggacgccggagggagtcgtgaaccggggcgatgcagcgtgtccggcg
tgctccgctacgcgcgtctcctccctggacagcggcaccaccacgtgcgtgtcgtccttc
gacagcgcccgcctctcggagagcaccgccttctcgtcgcaggacgaggacgaggcctcc
gttgacgcggccacagatgggacggccgaggggagcaggactcagggcgcgggcggccgg
gcgtgctgcggcgcgtgcggagggatggcgaccgcggccggagtcccggagcgcggcgag
gccgacggccggggcccggacaacgaggaggcgatctggcagcgacgccacagcctgcag
gcggcgacccaggaggcggaggccgacgaggtggccagggccttgccagccaccgcgtgt
ccctccgcagatgagcctccctcacgggagagcagccacccgcccctgtgccagctgccc
tccatccggcaggacatgagtcgctaccagcgtgtggacgagcccctgccggccaactgg
gaggcccgcatcgacagccacggccgtgtcttctacgtggatcacgtgaaccgcatgacc
acctggcagcggcccacggcctcctcctccccgcaggtcctgcagcgatccaactccatc
cacgccgtgcagcagatggagcagctcaaccgacggtaccagagtgtgcgtcgcaccatg
accagcgaccgctctgcggcggaggaagagggtggagcggtgggcggagccagcagcgac
ggggcccctgggcccggcgaggaggaggagccggacgcagcccctcccatcagcgatcag
cagcggcgggactctgcgcctgccggacaccacatgatgcacacgaggatgagcctcttg
ctccagtcgcccgccgtcaagttcctctcttgcccggacttcttcacgctgctccactcc
aaccccagcgcctaccacctgtttgctaacagcacctgcctgaagcacatgatcagcaaa
gtgcggcgcgactcgcacaactttgagcgctaccaacacaacagggacctggtggccttc
ctcaacaccttctccaacaaacagctggagctgccgcgtggatgggagatgaagtacgac
caccagggtaagccgttcttcgtcgaccacaatgcgcgcaccaccaccttcatcgacccg
cgtctccccgtgcagagcgcccgccccccggggcctatcgctcaccgccgccacctgcag
cgccagcgcagccacagtgccagcgaggtcggcgacgatcagaggcaccacgggccgcct
gtcacaccgcgccccgccaacaccctcagcgtgagcggccgctacccctaccacgactcc
atgcccatcgcatacaacgacaaaattgtcgcatttctccggcaacccaacgcatttgag
attcttcaagagaggcagccgggtctcagcagacacccctctctcagggagaagatccag
ttcgtgcgcagcgagggcacgtcgggcctggagcgcctctcgggcgacgccgacctcgtc
atcctgctcagcctctttgaggatgaaatcatgtcgttcatcccgccgcactccctgctg
caccccagctacacgcagtccccacgcagctcgccggggtcgtcgccgcagaactccccc
ggatcgcagcgcgcgaacgcccgcgccccggccccttacaagagagacttcgaggcgaag
ctgcgcaacttctaccgcaagctggagtccaagggatacggacagggtcccggcaagatc
aagctggtcatcaggcgcgaccatctactggaggacgccttcaatcaggtgatggcccac
tcgcgcaaggacctgcagagaaacaagctctacgttacctttgtgggcgaggaggggctg
gactacagcgggccctcccgggagttcttcttcctggtgtcgcgagagctcttcaacccc
tactacggcctctttgagtactcggccaacgacacgtacaccgtgcaaatcagccccatg
tcggccttcgtggacaaccatcacgagtggttccggttcagcgggcggatcttgggcctc
gccctcatccaccagtacctgctggacgccttcttcacacggcccttctacaaggctctg
ctcagaacgccgtgtgatctgagtgacctggagtacctggatgaggagttccaccaaagc
ctgcagtggatgaaggacaacgacatcacggacatcctggacctgacctttaccgtcaac
gaagaggtgttcggacagatcacggagagggagctgcgaccgggcggagcgcacatggcc
gtgacagagaagaacaagaaggagtacatcgagcgcatggtcaagtggcgcgtggagcgt
ggcgtggtgcagcagaccgagagcttggtgcggggcttctacgaggtggtggacgcgcgg
ctcgtgtcagtgtttgacgcccgcgagctggagctggtgatcgctggcacggccgagatc
gacctgctggactggaggaccaacacagagtaccgtggcggataccacgacagccacatc
gtcatgcgctggttctgggcggccgtggagaggttcaacaacgagcagaggctgaggctg
ctgcagttcgtcacgggcacgtcgagcatcccgtacgaggggtttgccgcgctgcgcggc
agcaacgggccccgcaagttctgcatcgagaagtggggccggatcacctcgctgcccaga
gctcacacgtgcttcaaccgcttggatctgcctccctacccgtcgtacgccatgctctac
gagaagctgctcaccgccgtggaagagacgagcaccttcggcctggagtaa
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