Petromyzon marinus (sea lamprey): 116938847
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Entry
116938847 CDS
T09614
Symbol
ERCC1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03420
Nucleotide excision repair
pmrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116938847 (ERCC1)
03460 Fanconi anemia pathway
116938847 (ERCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116938847 (ERCC1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116938847 (ERCC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-GeneID:
116938847
NCBI-ProteinID:
XP_032802455
UniProt:
A0AAJ7SPL5
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Position
4:24181462..24194468
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AA seq
372 aa
AA seq
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MDAKKKFDIPRVEDVYERRVSEPRPLFRSGLTKTAEKDSVEEMPPPGPHKGSYADYVMEQ
SKKQPPAPSDPASSNPAGPSEPGPQAGGADKATPAEASRPFGRDAETDSTGCPDQETSMP
ARAADSPLVEVVRSREASGKREASGTSRAAGGVDAMAVVAPKAAGKSNSLLVNPRQRGNP
VLKFVRNVPWEIADVVPDYVMGQTSCALFLSLRYHNLNPNYVHERLKQLGQAFDLRVLLV
QVDVKDPHHALKELAKMCILAECTLILAWSPEEVARYLETYKAYENKPADLLKERVEQDY
LSRMTDCLTTIKSVNKTDVITLLNTFGSLANIMEASKEDLSLCPGLGPRKARSLSSVFHE
PFLKAKKPKKGS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagaagaagttcgacattccgagggtggaggacgtgtacgagaggcgggtg
tctgagcctcggcctctgttcagatctggcctcacaaagacagctgaaaaagacagcgtg
gaggagatgccaccacccgggccacataagggcagctatgccgactacgtcatggagcag
agcaagaagcagccgccagctccctccgacccagctagcagcaaccccgcagggcccagt
gaacctggtccacaggccggcggtgcggacaaggccactccagcagaagcgtcgaggcca
ttcggcagagacgcagagacagactccacagggtgcccagaccaggagaccagcatgcct
gcccgagctgctgacagtccgctcgtcgaggtggtgagaagccgagaggcttcggggaaa
cgtgaggcttcgggtacaagtagagctgcaggtggtgtcgatgccatggctgttgtggcc
cccaaggcggccggcaagagcaacagcttgctggtgaacccccgacagcgtgggaacccc
gtgctcaagtttgtgcggaacgtgccttgggagattgcggacgtggtcccagactatgta
atggggcagacctcctgcgcactcttcctcagcctgcggtatcacaacctcaaccccaac
tacgtccacgagcgcctcaagcagctgggtcaggcgttcgacctccgcgtgcttctggtg
caggtcgacgtgaaggacccacaccacgcactcaaggagctggccaagatgtgcatcctg
gcagagtgcactctcattctggcctggagcccggaggaggtggcccgctacctggagacg
tacaaggcgtacgagaacaagccggccgacctgctgaaggagcgtgtggagcaggactac
ttgtctcgcatgactgactgcctgaccaccatcaagtccgtgaataagacagatgtcatc
actctattgaacacttttgggtcactggcaaacatcatggaggcatccaaagaggatctg
tcactctgtcccggactgggacctcgcaaggctcggagtctgagcagcgtgtttcacgag
ccctttctcaaagccaagaagccaaaaaaggggtcttga
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