Petromyzon marinus (sea lamprey): 116938890
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Entry
116938890 CDS
T09614
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116938890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116938890
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116938890
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116938890
Coactivators
SAGA/TFTC/STAGA complex
116938890
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116938890
STAGA complex
116938890
TFTC complex
116938890
SAGA complex
116938890
SLIK complex
116938890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
116938890
NCBI-ProteinID:
XP_032802521
UniProt:
A0AAJ7WLV1
LinkDB
All DBs
Position
4:complement(24151597..24181933)
Genome browser
AA seq
794 aa
AA seq
DB search
MSTSRRARPKKLAPATALPADSVRFMGESVGAFPLVDDACETLAENVVLRLRQLLQEAAK
FTRASKRRRMSTGDLDFSLKTMNVEPLYGFESKEFTPFRFASGGGREVYFAPEQELCLSE
LISTPLPRVPLQVSIRAHWLCIDGVQPAIPENPPPVPREQQKLEAVGVDARGPVGPSGSV
DPRRAGRPSQSAYVRVHRRHPHELSMELQRFYCEVTEATMGSSEPKRIEALQSIAMEPGF
YQLMPQLSTFISEGVRINIVHNNLALLIYLMRMVKALLENPNIYLEKYLHELMPAILSCV
VSRQLCQRPDVDNHWALRDFASRIAAQACRMYTSPANALLGRTSKAMLKSLSDSAAVWTT
HYGCLAVLCELGPEVISSLVLPRLKQEGERIRSILSGQAISSGDLFGAQRVESIILKHCA
PVLAQRRAVPDVVSAYRADYGWMGPALCEHVLRARSLALRCTLSLQAQRSTVGAQSAVPT
SVAAQGPAAPSGVPRLPPTPARSTTMAPAAPAAAAGPPSGRALPTSATPSAPGPPTASAG
AASLEARCWAVAKPAMADGVLKERLLSPSPPLPPPPPPPTPAKQFVAVSSSTAATAVTVP
QVLSLVSVTSSVASCHTTTSSTLVKLASGAPGPVPHKFIVVSLPATASRSPGGQKSPAPT
LAQLQQQVALGRPHPSGFLLQASPAGTHHIVRLPGVQGQALGKALTQIACGQALTLKPQS
SLLGQAPAVGGRAVDPLGSAAQGRGAELPVEANVMLAQIQAPPLATKGLVAATTIQGHMG
CAPGKAEVSDQQRP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctcccgcagggcccggcccaagaagctggcgccggcgacggctctgcctgcg
gactctgtgcggttcatgggcgagtcagtgggtgccttcccactggtggacgacgcgtgc
gaaacactcgcggagaacgttgtccttcgcctgcgtcagctgctgcaggaggcggccaag
ttcacgcgagcgagcaaacggcggcggatgagcacaggggacctcgacttctcattgaaa
acgatgaatgtggaacccctgtatgggttcgagtccaaggagttcactccgttccgcttc
gccagtggaggtggccgagaagtctactttgctccggaacaggagctgtgtctgagcgag
ctcatcagtacgccgctacctcgcgtgcccctgcaagtctccatcagagctcactggctg
tgcatcgatggcgtgcagccggcgattccagaaaatcctccgcccgtgccaagggagcag
cagaagctggaggcagtgggggtggacgcgaggggacccgtggggccgtccgggagcgtg
gaccctcgcagagcagggcggccgtctcagagtgcgtacgtgcgagtgcatcggcggcac
ccgcacgagctgtccatggagctgcagaggttctactgtgaagtgacggaggccaccatg
ggctcctcggagcccaagagaattgaggccctgcagagcattgccatggagccgggcttc
tatcaactgatgcctcagctcagcaccttcatatcagagggggtgcggattaacattgtc
cacaacaacctggctctactcatctacctgatgcgcatggtgaaagcactgctggagaat
ccgaacatctaccttgagaaatacctacacgagctgatgcccgccatactgtcatgcgtc
gtgagccgccagctgtgccagcggccagacgtcgacaaccactgggcgctgcgggacttt
gcgtcgcgcattgcggcccaggcgtgcaggatgtacacgtcacctgccaacgccctgttg
ggccgtacctccaaggccatgctcaagagcctgagtgactccgccgcggtatggaccaca
cactacggctgcctcgccgtgctgtgcgagctgggaccagaggtgatctcctcgctggtg
ctgccccgcctcaagcaagagggagagagaatccggtcgatcctgagcgggcaggccatc
agcagtggcgatctctttggcgcccagcgcgtggagagcatcatcctgaagcactgcgca
ccggtgctggcgcagcggcgcgcggtgccagacgtggtgtccgcgtaccgcgccgactac
ggctggatgggccccgcgctgtgtgagcacgtgctgcgcgctcgctcgctcgccctgcgc
tgcacgctttccttgcaagcacagcggagcacggtgggagctcagagcgccgtcccaacc
agcgtcgccgcccagggccccgcggcccccagcggcgttccacgactgccacccaccccc
gccagatccacgacaatggcacccgcggcaccagcggcagcggcagggcccccgtccggc
cgagcgctccccacgtcggcgacgccatcggcgccgggtcccccgacggcgagtgccggc
gccgcctccctcgaggcacggtgctgggcggtggccaaaccggcgatggccgacggggtc
ttaaaagagcggctcctctccccgtcgccgccactgccgccaccaccaccaccaccgacg
ccagccaagcagttcgtggcagtgtccagcagcacggccgcaacggcggtcaccgtacca
caggtgctgtcgctggtgtcggtcacgtcctctgtggcttcgtgccacaccaccacctcc
tccacactggtgaagctggcgtccggagcgcccggcccagtccctcacaagttcattgtc
gtgtcactaccggccaccgcgagccgctctccggggggccagaagtcgccggcccccaca
ctggcccagctgcagcaacaggtggcactcggacgcccgcacccctcagggtttctgctg
caggcctctcctgcggggacgcaccacattgtgcggctgcccggcgtgcagggacaggcc
ctgggcaaggccctgacgcaaatcgcgtgtggccaggcgctcacgctgaagccgcagagc
tccctcttggggcaggcacccgcggtcggaggtcgagcggtggacccgctcgggtccgcc
gctcaaggccggggtgcggagttacccgtggaagcaaatgtgatgttagcgcagattcag
gcaccgccgcttgcgacgaagggcctggtggctgcgaccaccattcaaggccatatgggg
tgtgcgcccggaaaggctgaggtttctgaccagcaaaggccctga
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