KEGG   Petromyzon marinus (sea lamprey): 116938970
Entry
116938970         CDS       T09614                                 
Symbol
WDR46
Name
(RefSeq) WD repeat-containing protein 46
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmrn03009]
    116938970 (WDR46)
Ribosome biogenesis [BR:pmrn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116938970 (WDR46)
SSDB
Motif
Pfam: BING4CT WD40_CDC20-Fz WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR5 EIF3I WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WD40 Beta-prop_TEP1_2nd Beta-prop_Nup120_160 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML Beta-prop_Vps41 B-prop_COPA_B_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_SCAP WD40_MABP1-WDR62_1st UvrC_RNaseH Beta-prop_DCAF4 NBCH_WD40
Other DBs
NCBI-GeneID: 116938970
NCBI-ProteinID: XP_032802647
UniProt: A0AAJ7SNK6
LinkDB
Position
5:3516293..3541135
AA seq 590 aa
MATSGKLAGEANAPEEKSKPAAKGKKKPAKRYWEPEKFEDVMINKTPLERSQGEKPERWE
VENKVQQHRFSQSAKSKDVFFGPAPLPETRVKRFQRGEKFKLKGRQTGALRELVKRATKN
AELASQQTARCDLLLPETQGFIEPDEGEETSYITQRDIQDEVDITSASKSFELDLNQFGP
YRVDYTRTGRHLLLGGTRGHVAAFDWVTKSLMCEMNVMETVKDIKWLHTEAMFAVAQLHW
VYVYDSQGIELHCLKRFHNITRMEFLPYHFLLATASSSGFLQYLDVSIGKEISTICTKGG
SLQTMCTNPYNAIVNLGHHNGSVTMWTPTMKEPLVKMICHRGAVRSVAVERTGTYMATSG
LDHKLRVWDVRTYRPLHSYVLSSGASNLDFSHRSLLAATCGNVVQVYKDTHLGVGRPYLT
HVSPHHAHSLQFCPYEDVLGLGHGNGFTSLLVPGAGEPNFDALEANPLRSKKQRQEWEVK
ALLEKIQPELITLDPAMLSKVDTASFETKYAERVQRLGFDPKAPQKFEPRYRTKGRSSTA
NRELRKRIVAGTQKRETIKASMEEKQKKQREKIQSNQTEAKGGALQRFKK
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggcgacgagcggcaaacttgcgggcgaggcgaacgcgccggaggagaagtcgaagccc
gcggcgaaggggaagaagaaaccagccaagcggtactgggagcctgaaaaattcgaagat
gtgatgatcaacaagactcctctagaacggagccagggagagaagcccgagagatgggag
gttgaaaataaagttcagcaacatcggttttcgcaatccgccaagtcaaaggacgtgttc
tttggtcccgcgcccctgccagagacgagagtgaagcggttccagcgtggagagaagttt
aaactgaaaggacggcagaccggggcgttgcgagagttggtgaagcgcgctaccaagaat
gcagagctggcgagccagcagacggcacggtgtgatctgctgttgcctgaaacgcaaggg
ttcatagagccggacgagggtgaggagacgtcgtacataacgcagagggacatccaggat
gaggtggacatcaccagtgccagcaagagttttgaattggacctgaaccagttcgggcca
tatcgagtggattacacacgcactggccggcacctgctgctgggcggtacacggggccac
gtggctgcgtttgactgggtcaccaagtccctgatgtgcgagatgaacgtcatggagacg
gtcaaggacatcaagtggctgcacacggaggcgatgttcgccgtggcccagctgcactgg
gtgtacgtgtacgactcgcagggcatcgagctgcactgcctcaagcgcttccacaacatc
acccgcatggagttcctgccctaccacttcctgctggccaccgcgagctcatcggggttc
ttgcagtacctggacgtgagcatcgggaaggagatctcgacgatctgcaccaaagggggc
agcctccagaccatgtgcacgaacccatacaatgccatcgtgaacctgggtcaccacaat
ggctccgtgaccatgtggacccccacgatgaaggagccgctcgtcaagatgatatgccac
cggggagccgtgcgctccgtcgccgtggaacgcaccggcacgtacatggcgacgtcgggg
ctggaccacaagctgcgagtctgggacgtgcgcacttacaggcctctgcactcgtacgtc
ctcagctcgggcgcctccaacctggacttcagccaccgctcactgctggccgccacctgc
ggcaacgttgtacaggtctacaaggacacccaccttggtgtgggccggccctacctgacg
cacgtctctcctcaccacgctcactcgctgcagttttgcccctatgaagacgtgcttggt
ctcggccatgggaatggcttcacgagcctcctggtgcccggagcgggtgagcccaacttc
gacgcgttggaggctaatcctctgcgcagcaagaaacagaggcaagagtgggaggtgaag
gctctgctggagaagattcagccggagctcatcacgcttgacccggccatgctgagcaag
gtggacacggcttccttcgaaacaaagtacgcggagagggtgcagcggctgggtttcgac
ccaaaagctccccagaagtttgagccgaggtaccgcaccaagggccgcagctccaccgcc
aatcgcgagctgcgaaaacgcatcgtggcagggacacagaaacgggagacgatcaaggct
tctatggaagaaaagcagaaaaaacagagagagaagatacaaagcaaccagacggaggcc
aaggggggagccctgcagagattcaaaaaataa

DBGET integrated database retrieval system