Petromyzon marinus (sea lamprey): 116938970
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Entry
116938970 CDS
T09614
Symbol
WDR46
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116938970 (WDR46)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116938970 (WDR46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_Nup120_160
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
UvrC_RNaseH
Beta-prop_DCAF4
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116938970
NCBI-ProteinID:
XP_032802647
UniProt:
A0AAJ7SNK6
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Position
5:3516293..3541135
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AA seq
590 aa
AA seq
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MATSGKLAGEANAPEEKSKPAAKGKKKPAKRYWEPEKFEDVMINKTPLERSQGEKPERWE
VENKVQQHRFSQSAKSKDVFFGPAPLPETRVKRFQRGEKFKLKGRQTGALRELVKRATKN
AELASQQTARCDLLLPETQGFIEPDEGEETSYITQRDIQDEVDITSASKSFELDLNQFGP
YRVDYTRTGRHLLLGGTRGHVAAFDWVTKSLMCEMNVMETVKDIKWLHTEAMFAVAQLHW
VYVYDSQGIELHCLKRFHNITRMEFLPYHFLLATASSSGFLQYLDVSIGKEISTICTKGG
SLQTMCTNPYNAIVNLGHHNGSVTMWTPTMKEPLVKMICHRGAVRSVAVERTGTYMATSG
LDHKLRVWDVRTYRPLHSYVLSSGASNLDFSHRSLLAATCGNVVQVYKDTHLGVGRPYLT
HVSPHHAHSLQFCPYEDVLGLGHGNGFTSLLVPGAGEPNFDALEANPLRSKKQRQEWEVK
ALLEKIQPELITLDPAMLSKVDTASFETKYAERVQRLGFDPKAPQKFEPRYRTKGRSSTA
NRELRKRIVAGTQKRETIKASMEEKQKKQREKIQSNQTEAKGGALQRFKK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagcggcaaacttgcgggcgaggcgaacgcgccggaggagaagtcgaagccc
gcggcgaaggggaagaagaaaccagccaagcggtactgggagcctgaaaaattcgaagat
gtgatgatcaacaagactcctctagaacggagccagggagagaagcccgagagatgggag
gttgaaaataaagttcagcaacatcggttttcgcaatccgccaagtcaaaggacgtgttc
tttggtcccgcgcccctgccagagacgagagtgaagcggttccagcgtggagagaagttt
aaactgaaaggacggcagaccggggcgttgcgagagttggtgaagcgcgctaccaagaat
gcagagctggcgagccagcagacggcacggtgtgatctgctgttgcctgaaacgcaaggg
ttcatagagccggacgagggtgaggagacgtcgtacataacgcagagggacatccaggat
gaggtggacatcaccagtgccagcaagagttttgaattggacctgaaccagttcgggcca
tatcgagtggattacacacgcactggccggcacctgctgctgggcggtacacggggccac
gtggctgcgtttgactgggtcaccaagtccctgatgtgcgagatgaacgtcatggagacg
gtcaaggacatcaagtggctgcacacggaggcgatgttcgccgtggcccagctgcactgg
gtgtacgtgtacgactcgcagggcatcgagctgcactgcctcaagcgcttccacaacatc
acccgcatggagttcctgccctaccacttcctgctggccaccgcgagctcatcggggttc
ttgcagtacctggacgtgagcatcgggaaggagatctcgacgatctgcaccaaagggggc
agcctccagaccatgtgcacgaacccatacaatgccatcgtgaacctgggtcaccacaat
ggctccgtgaccatgtggacccccacgatgaaggagccgctcgtcaagatgatatgccac
cggggagccgtgcgctccgtcgccgtggaacgcaccggcacgtacatggcgacgtcgggg
ctggaccacaagctgcgagtctgggacgtgcgcacttacaggcctctgcactcgtacgtc
ctcagctcgggcgcctccaacctggacttcagccaccgctcactgctggccgccacctgc
ggcaacgttgtacaggtctacaaggacacccaccttggtgtgggccggccctacctgacg
cacgtctctcctcaccacgctcactcgctgcagttttgcccctatgaagacgtgcttggt
ctcggccatgggaatggcttcacgagcctcctggtgcccggagcgggtgagcccaacttc
gacgcgttggaggctaatcctctgcgcagcaagaaacagaggcaagagtgggaggtgaag
gctctgctggagaagattcagccggagctcatcacgcttgacccggccatgctgagcaag
gtggacacggcttccttcgaaacaaagtacgcggagagggtgcagcggctgggtttcgac
ccaaaagctccccagaagtttgagccgaggtaccgcaccaagggccgcagctccaccgcc
aatcgcgagctgcgaaaacgcatcgtggcagggacacagaaacgggagacgatcaaggct
tctatggaagaaaagcagaaaaaacagagagagaagatacaaagcaaccagacggaggcc
aaggggggagccctgcagagattcaaaaaataa
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