Petromyzon marinus (sea lamprey): 116938997
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Entry
116938997 CDS
T09614
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116938997
03041 Spliceosome [BR:
pmrn03041
]
116938997
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116938997
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116938997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
116938997
NCBI-ProteinID:
XP_032802694
UniProt:
A0AAJ7SP73
LinkDB
All DBs
Position
5:complement(4510573..4577227)
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AA seq
753 aa
AA seq
DB search
MADFSLGVAQAAAAAGGGAGSLKPEVFADAVQRARQIAAKIGSDPVPGGAAIDMASAYGF
PGQKRPLEDADVPWTGPPPTRAGLELALSPPDNPDSKKMAPQSDPIGAQLAAIQQQQSGR
GGDAPEMGWSPPPRFDSPDGDPHWPPSHHGGGGGGGGLNPRAQTEEMKIPDKMVGFIIGR
GGEQVSRLQTETGCKIQISPDAVVDATGLMERTCMLMGPPEAIQHAKSLIDQIIERCRNG
GPSENGADGMVEIIVPADKVGLVIGKGGETIRQLQDRAGVKMVMIQDNRQNSGVDKPLRI
TGDPYKVQVGVPPLQQGRLPPRSSQAKEMVIEFLRKEDHRERFGEFAGRTGGRESVKIAV
PRFAVGVVIGRSGDMIKKLQNEAGVRIQFQPDDGSGPERMAQIMGVPENCQRAAMMIIEL
INGMQMEGREGPPGGMGPRGRGGRGRGFGDWSPGPPGGMQDQITYTVPAEKCGIIIGKGG
ETIKHISQTSGARVELQRNPPPNTDPNIRIFLIRGSPQQVDHARHLMDEKMGLGGPSAFG
GPPAAFGQGPYGQGPPGPPHQNGPGQAFAPQAGGWPGGYQPWAQGQQQQQQQQQQQPQQN
PAAQDPSKSGDPNSAAWAAYYAQYYGQQPTQHNPAHTADPSQPAGGQNGQPDYTKAWEEY
YKKIGQQNPSSQQPDYSKAWEEYYKKQAEAQGQGSGGAAPGSQQQQQQQGQPGQQGGQPD
YSAAWAEYYRQQSQQAYYAPGGAQGNPNAPQGH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttctctctcggggtcgcgcaggcggccgcggcggcgggcggcggcgccggg
agcctcaagcccgaggtgtttgccgacgccgtgcagcgcgcgcgacagatagcagcgaag
ataggctcggacccagttccgggtggtgctgcaatagacatggcatcggcgtacggcttc
ccggggcagaaacgtccactggaggatgccgatgtcccttggacgggccccccgcccact
agagcaggcttggagctcgcgctgtctcctccagacaatcctgacagcaagaaaatggcg
ccacaaagtgacccaattggtgctcagttggcagcgatacaacagcagcagagcggcaga
ggtggagatgcccccgagatgggatggtcaccaccgccccggttcgactccccggacggg
gaccctcactggccgccctcccatcacggtggaggcggaggcggaggtggtctcaacccc
agggcccaaacagaggaaatgaaaatccccgataagatggttggattcatcattggcagg
ggcggtgagcaagtttcaaggcttcagactgaaaccggctgcaaaatccagatctcacca
gatgcagttgtggatgccactggcctcatggaacgcacgtgcatgctcatgggaccgccc
gaggccatccagcacgccaagagtctcatcgaccagattatcgagcggtgcaggaacggg
ggcccctcggagaacggcgctgatggaatggtcgagatcattgtccctgccgacaaggtg
gggctggtcatcggcaagggaggcgagaccatccggcaactccaggaccgtgctggtgtc
aagatggtcatgatccaggacaaccggcagaactcgggcgtggataaacctctccgcatc
accggcgacccttacaaagtccaggtcggtgtgccgccactgcagcagggcaggctgcct
cccagaagctcgcaagccaaggagatggtcatcgagttcctcaggaaggaggaccaccgc
gagaggttcggggagtttgcaggccggacgggaggccgcgagtctgtcaagatcgctgtg
cctcgatttgcggtgggcgtggttatcggccgaagtggtgacatgatcaagaagctgcag
aacgaggctggagtccgcatacagtttcagcctgatgacggcagtgggcccgagcgcatg
gctcagatcatgggcgtcccggagaactgccagcgagccgccatgatgattatcgagctc
atcaatggcatgcagatggaagggcgcgaaggaccccctggtggcatgggaccacgaggg
aggggcggccgtgggcggggcttcggggactggagcccagggcctccgggaggaatgcag
gaccaaatcacctacaccgtgcccgcggagaagtgtggcatcatcattggcaagggcggg
gagaccatcaagcacatcagccagacatcgggcgcacgggtagagctgcagaggaatcct
ccccccaacaccgatcccaacatccgcatcttcctcatccggggctcgccgcagcaagtg
gaccacgcgaggcacctcatggatgagaagatggggctcgggggaccttctgctttcggg
ggaccacctgccgctttcggacagggtccctatggccagggacccccaggccctcctcac
caaaatggacccgggcaggccttcgctccccaggcgggtgggtggcccggtggataccaa
ccctgggcacaggggcagcagcagcaacaacagcagcagcagcagcagccacagcagaac
cctgctgcgcaagaccccagtaagtcaggagaccccaactctgccgcctgggctgcatac
tacgcccagtattacggacagcagcccacgcaacacaaccccgcgcacacagcagatccg
agccagccagcaggcgggcagaacggacagcctgattacaccaaggcatgggaagagtac
tacaagaaaattggtcagcagaatccaagcagccagcagcctgattacagcaaggcttgg
gaggaatactataaaaagcaggccgaagcccagggacaaggcagcggtggtgcggcccct
gggtcgcagcagcagcagcagcagcaggggcagccagggcagcaggggggccagccggac
tacagtgccgcctgggccgagtactaccggcagcagagccagcaggcgtactacgctccc
ggtggggctcagggcaaccccaacgcgccgcagggccactga
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