Petromyzon marinus (sea lamprey): 116939012
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Entry
116939012 CDS
T09614
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein-like
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116939012
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116939012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
DUF7952
Myb_DNA-bind_7
Myb_DNA-binding
DUF7573
YxzE
Motif
Other DBs
NCBI-GeneID:
116939012
NCBI-ProteinID:
XP_032802743
UniProt:
A0AAJ7SQE7
LinkDB
All DBs
Position
5:complement(5191415..5241007)
Genome browser
AA seq
2111 aa
AA seq
DB search
MASSRSSSDGHAPPATANNATAVHCGGAPVHCGGGSGRRRRSCTVDGGGGGGSAGGGGVV
TGVSGGGGGGADSDCVDEDEMEKEMAGLPDESRKSKPRKSAKRKPRFQRNDNGDIATYTT
DDATIYQPGDCVYIESRRPDIPYFICSIQDFKLSKRDHLMMNVKWYYRQSEVPDSVYQLL
VQDRHNENDSGRDLVIVDPVIRSRELFISDCIDTYHASALRGKCGVSHFSDIFAAKDFKA
KSDTFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPELLVPLGSLVPDSESGGDGTAFEE
RVWIPGISDCDLIMYLRAARSMAAYAGMCDGGLTEDGCLAASRDDTTINALDVLHASGYD
RGKALQTLLLKPFPRSVDKRWSDDETKRFVRGLRQFGKNFFRIRKELLPHKETGELVTFY
YYWKKTPEASHSRPHRRHRRQAVFRRIKTRTIPTATPPASQSRPPSSEFLDLSSASEDDF
DSEDSDQELRGYACRHCFTTTSRDWHHGGRDRLLLCYDCRLYFKKYGEMPPIQHQAPPPP
FMFKPVRDDDATAPNNQGSGVPGSAGGGAATPPVGKHSMRTRRSRTSARAQAGEPTADDS
RACGRTSPGATSTDSTDLDKHSKKAPEAETPPPHAGKRLRDKSLSDGEDAEKPKKPKTPS
TSPPGSPSEGDSSDAPSLNDDLINDLKDIDQDNRSTSPSLPSPPEPESDSDCSTHNADAT
IVPTVSSTVTPPAPAAANGPNQGGCLMAPISGLMPGSPAANGGLGSNTAMPPGGTSTSIS
SSLLPGGGGGGGGGGGGSGSSGGGGGGAGLNMPTLMGGLGSNLSQVAMSSGGGGTTGGGP
QVAVANVGPCGPPSAAAAAAAAAAAVAQMNVAPMGSCAVAQAFHSVVSGGGVSSMQQSVS
VVGGGGAGGAASMSVVSASSSSSSSGSSLSSSLSLHTQAIGGVYGGGGVGGVSGVGSGLM
MSQTFSSSMSSSSSSSSLHLPHLSQQHHQHQHHHHHQHQHQHHQLHHLQQQHHQRGPHQH
HHQQQQQHHHASAHFGGHHHHHQHQQHHVEQARVHAPSPPLAGVMPAQLLPLPPSSAASV
FGSSKGNLATMGQGSAYDKPGGGMSICAGGGGGGSGVGGPPNLMAPHLSGGGGGGGGGGG
GAMHKHPMSVHSQGQAPPVPPPPPGGHGAPMQGLPSCLPANMQQQQQQQQNLPSNMAANS
GVPIPPPTTPIPPLPPKQSNSSAQSGGACGGGGGGGGGGGGALAGHFGGQLPPPNLNLPP
PPALKPLSALAQGGGGGVGGGGPTQGMGSGQGLPQLPPPLQMQAHPPPALTQGGAAGQQG
GPATLGESLASAYPGPLGGGSGGSMMGPAHPPALTQSGPHSLGDPQALAYGGKPQGGSGG
GSGSGGGGAGGIPPFLAANPGLMSNVGGMGTVSSASMMGSAGAAALSLTASVASVSSSSL
SCAPASLSASSLPPPSATASSSSSSAPSVLPSAVPPGFGTVKEEGGGSVSATGAVGAAVA
MAAEESPGSPGSPPPPVRRTPSPEPIVVDTPSHVSASARFTKHLDRGYNSCARTDLCFEP
LAGSKLAKKREDGAERLRREREERERDGREREARERDRSSLGPGLDGPPSGGPPPPGPPP
GPPGPPPHHLRGTPYDAPQSAAAVAAVHPYLGPDTPALRTLSEYARPHVLSPTSGSALVR
SGVAGVAAAAAAAAAAAAAGHGPPHHHQAAHHHPHHHPHHHPHHHHHPFFAIPSSDVATI
FYHPHNMAAAAHMYSQQQQQQISQQISQQISQQQAQQQAQQQAQQQAASVQQQQQQSSER
DLREMRFKPGYEMKPPEMDGAGGGGSAPAGPSTQGGASMASALALHFNPAGSLDPFALQR
AGAHASLGVNPHHFAAFPAGERGHGHGGGGGGGGGAGGAGGGGGGGGGGGGSGAGGAAER
LGVVPGGVAQSRQEMAYAERLHAERLASLAANDPIAAARLQMYNVTPHHHQHSHIHSHLH
LHQPDSIHPGSGVHPLMDPLVPHVGRFPYPPGPLPSPLMGPPPPTGPEHELLRHPLFAPG
YRDLPPLPPHMSAAHQLQAVHQSAEMQRLALEQQQWLHASAHHAHHAAAAHLASAHDDYY
SRLKKENEKPL
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcacggtcgtcgagtgacgggcacgccccgcccgccactgccaacaacgcc
accgccgtgcattgtgggggggccccggtgcactgtgggggcggtagcgggcgcagaagg
cggagctgcacggtggacggcggtggggggggtggcagtgctgggggcgggggggtggtg
accggagtgagcggtggaggaggaggaggagctgacagtgactgcgtggacgaagatgag
atggagaaggagatggcaggcctccctgatgagagccggaagtcgaagcctcggaagtcg
gcgaagaggaaacctcgattccagaggaacgacaacggagacatcgccacgtacacaacg
gatgacgccaccatctaccagcccggggactgcgtgtacatagagtcgcgacggccagac
atcccctacttcatctgcagcatccaggacttcaaacttagcaagagggaccacctcatg
atgaacgtcaagtggtactaccggcagtccgaggtgccggactcagtctaccaactacta
gtccaagaccggcacaacgagaacgattctggccgggacctagtgattgtggaccccgtc
atcaggagccgggaactcttcatatcggactgcattgacacgtaccacgcgtcggccctc
cggggtaagtgtggcgtgtcgcacttttcggacatctttgctgcaaaggatttcaaagcc
aagtccgacacattcttctacatccttggatacaaccctgagacgaggaggctgaacagc
acccagggagagatcagagttggaccaagccaccaggcgaagctgccggagctgctggtt
cccctgggttcgctggtgccggactctgaaagtggcggcgatggcactgcgttcgaggag
cgcgtctggatccccggcatctccgactgcgacctcatcatgtacctgagagcggcgcgg
agcatggctgcctatgcggggatgtgcgacgggggcctcacggaggacggatgcctcgct
gcctcgagggatgacacgaccatcaacgctctggacgtgctgcatgcaagcggctatgac
cggggcaaggccttgcaaacactgctgctcaagccattccctcgctccgtggacaagcgc
tggagtgacgatgagactaaacgttttgtgcgtgggctcaggcagtttgggaagaacttt
ttccgcatccgcaaagagctgctgcctcacaaagaaacgggcgagctcgtcacattctac
tattactggaagaagacgccggaggcgtcgcactcgcgcccgcaccgccgtcaccgccgc
caggccgtgttccgccgcatcaagacccgcaccatccccacggcaacgcccccagcgagc
caatcgcggccgccctccagcgagttcttggatctgagctctgcgagtgaggacgacttt
gatagtgaagacagtgaccaggagctgcgtggttacgcctgcagacattgcttcaccacc
acgtcgcgagattggcaccacggcgggcgcgaccgcctgctgttgtgctacgactgccgc
ttgtacttcaagaagtacggggagatgccgcccattcagcaccaggcaccaccgccgccg
ttcatgttcaaacccgtgcgggacgacgacgccaccgcccccaacaaccaggggtccggg
gtgcccggcagtgcaggcggaggcgctgcgactcctcccgttggaaaacacagcatgcga
actcgacgcagccgaacatctgcccgtgctcaggctggggagccaacagcggacgactcc
cgcgcgtgtggccgcacgtcgcctggggcgaccagcacggacagcacggacctcgacaaa
cacagcaagaaggccccggaggcggagacgccacctccgcatgccggcaagcgcttgcgt
gacaagagcctctctgacggcgaggacgccgagaagcccaagaagcccaaaacgcccagc
acgtctccgccgggatctccctcggagggcgacagctcggacgcccccagccttaacgac
gacctcatcaacgacctcaaggacatcgaccaggataaccgcagcacctcacccagcctg
ccgagcccgcccgagcccgagtccgactcggactgctccacccacaacgccgatgccact
atcgtgcccaccgtctcctccaccgtcaccccgccagcccccgccgctgcgaatggcccc
aaccagggcggctgcctcatggcccccatcagcggcctcatgcccggcagcccggccgca
aacggcggactcggctccaacaccgccatgcctcccggcggcacctcaacctccatcagc
agtagcctcctgcccggcggcggcggcggcggcggcggcggaggcggcggtagtggtagc
agtggtggcggcggtggcggcgccggtctgaacatgccgaccttgatgggaggtctggga
tccaacctgagccaggtggccatgagcagcggtggcggcggcacaaccgggggggggcct
caggtcgcggtggcgaacgtggggccgtgcggaccgccgtccgcggctgctgctgctgcg
gcggcggcggcggcggtggcgcagatgaacgtggcccccatgggcagctgcgcggtggcg
caggcatttcactcggtggtgtctggcggcggcgtaagctccatgcagcaatcggtgtcc
gtcgtgggcggcggtggcgcgggcggcgcggcgagcatgagcgtggtgtcggcgtcgtcc
tcgtcctcctcgtcggggtcatccctctcctcgtcgctgtcgctgcatacccaggccatc
ggtggcgtctatggcggtggtggcgtcggcggcgtcagcggtgtcggcagcggcctcatg
atgtcccagacgttttcgtcgtcaatgtcgtcgtcgtcctcgtcgtcgtcgctccatctg
ccgcacctgagccagcagcaccaccagcaccagcaccaccaccaccaccagcatcagcac
cagcaccaccagttgcaccacctgcagcagcaacaccaccagcgcggcccgcaccagcac
caccaccagcagcagcagcagcatcaccacgcctctgcgcactttggtgggcatcaccat
caccaccagcaccagcagcaccatgtggagcaggccagggtccacgcgccatcgccgcct
ctggctggagtgatgcctgctcagctcctgccactgcctccttcttcggcggcgtcggtc
tttggctcatccaaaggaaatctggccacaatggggcaaggctcggcctacgacaagccg
ggtggcggcatgtcgatatgtgccggtggcggcggcggcggcagcggagtgggggggccc
ccaaatttgatggcgccgcacctgagtggcggtggaggcggtggcggcggcggtggcggt
ggtgcgatgcacaagcacccgatgagcgtgcactcgcagggccaggcaccgcccgtgcct
ccaccgccaccgggagggcacggtgcccctatgcagggcctcccgtcttgcctgccggca
aacatgcaacaacaacaacaacagcagcagaacctgccctcgaacatggctgccaactcg
ggcgttccgattcccccgcccacgactcccatcccacctctgccaccaaagcagtcgaac
tcaagcgctcagtcgggtggagcttgcggtggaggcggcggcggcggcggcggtggcggc
ggtgccctcgcgggccactttggggggcagctgcccccacccaacctgaacttgccgccg
ccgccagccctgaagccgctgtcggctcttgcgcagggaggcggcggcggcgtcggcggc
ggggggccgacgcagggcatgggctcgggtcagggtttacctcagctgccgcccccactg
cagatgcaggcacacccgccaccggcgctcacgcagggcggtgccgccggccagcagggc
ggccctgccacgctgggcgagtccctcgcttcggcctacccgggcccactcggtggcggc
agcgggggatccatgatggggccggcgcacccgcccgccctcacccagtccggcccgcac
tcactgggcgaccctcaggctttggcttatggcgggaagccgcagggcgggagcggaggt
ggttccggcagtggcggcggaggagcaggtgggatcccgccgttcctggccgctaatccc
gggctgatgtcgaatgtgggcgggatgggcaccgtgtcatcggcctcgatgatggggtcg
gcgggggcggccgcactgtccctcacggcgtcggtggcgtccgtctcctcgtcgtcgctt
agctgcgccccggcgagcctgtccgcatcctctctgccgccaccgtccgcaacggcttcg
tcctcttcctcatcggcgccgtccgtcctcccttcggccgtcccgcccggattcggcaca
gtgaaggaggagggagggggctcggtatcggctacgggggcagttggggcggcagttgcc
atggcggcggaggagtcgccgggatcccccggaagtcccccgcctcccgtgcgacgtacc
ccctccccagagcccatcgttgtggacacgccgagccacgtcagcgccagcgcacgtttt
acgaagcacctggaccgcggctacaactcgtgtgcgcgcaccgatctttgcttcgagccc
cttgcgggctccaagctcgccaagaagcgcgaggacggcgcggagcgtctgcggcgcgag
cgggaggagagggaacgcgacggacgcgagagggaggcgcgcgagcgcgaccgctcgtcc
ttgggccctggtctggacggccccccatccggcggaccccccccaccgggccccccgccg
ggtccgccaggcccccctccacaccacctacgcgggaccccctacgacgctccgcagtcg
gctgcggccgtggcggccgttcacccgtacctgggccccgacacgccggcgctgcgcacg
ctcagcgagtatgcgcgcccacacgtgctctcccccacctcgggcagcgccctcgtgcgc
tcgggggtggcgggggtggcggccgcggccgcggcggctgcggccgcggcggcagccggg
catggtcccccgcaccaccaccaggcagcgcaccaccatccgcaccaccacccgcaccac
cacccccaccaccaccaccacccattcttcgccatccccagcagcgacgtggccaccatc
ttctaccacccgcacaatatggcggcggcagcacacatgtactcgcagcaacagcagcag
cagatcagccagcagatcagccagcagatcagccagcagcaggcgcagcagcaggcccag
cagcaggcgcagcagcaggcggcctccgtgcagcagcagcagcagcagtcgagcgagcgg
gacctgcgagagatgcgtttcaagccgggctacgagatgaagccaccggagatggacggt
gcgggcggcgggggctctgcgccagcgggacccagcacgcagggcggcgcatcgatggcg
agcgcgctggcgctacacttcaacccagcggggtcgctggacccttttgcgctgcagcgc
gccggcgcacacgcctcgctcggcgtgaacccgcaccacttcgccgcgttccccgcgggg
gagcgcgggcatggccacggcggaggcggaggggggggcggtggcgcgggcggcgccgga
ggagggggcggcggcggcggtggaggaggcggctcaggagccgggggtgctgcggaacgg
ctgggcgtggtgccgggcggcgtggctcagtcgcgacaggagatggcgtacgccgagagg
cttcacgcagagcggctggcctcgctcgcggccaatgacccgatcgcagcggcgcgtctg
cagatgtacaacgtgacgccgcaccaccaccagcactcgcacatccactcgcacctgcat
ctgcaccagccggactcgatccatccaggctcaggcgtgcatccactgatggatcccctc
gtccctcacgttggacgcttcccgtaccccccagggcccctcccctcgcccctcatgggg
ccgccacctcccaccggacccgagcatgagctccttcggcatccgctcttcgcccccggc
taccgggacctgcccccgctgccgccacacatgtctgcggcgcaccagctgcaggcggtg
caccagagcgccgagatgcagcgtctggcgctggagcagcagcagtggctgcatgcgagt
gcccaccacgcccaccacgccgccgccgcgcacctcgccagcgcccacgacgactactac
agccgactgaagaaagagaacgagaagccgctgtga
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integrated database retrieval system
