Petromyzon marinus (sea lamprey): 116939074
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Entry
116939074 CDS
T09614
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116939074 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116939074 (PPIL2)
03110 Chaperones and folding catalysts [BR:
pmrn03110
]
116939074 (PPIL2)
04121 Ubiquitin system [BR:
pmrn04121
]
116939074 (PPIL2)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
116939074 (PPIL2)
Spliceosome [BR:
pmrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116939074 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
116939074 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
116939074 (PPIL2)
Chaperones and folding catalysts [BR:
pmrn03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116939074 (PPIL2)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
U-box type E3
116939074 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
V-set_CD47
U-box
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
116939074
NCBI-ProteinID:
XP_032802877
UniProt:
A0AAJ7SQX1
LinkDB
All DBs
Position
5:9523887..9577832
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AA seq
524 aa
AA seq
DB search
MGKRQHQKDKLYITCAEWTHLYGGKKPDGPKSDFRRLSFDRCSLSMLPFEHPMCTPDGIV
FDFMNIFPWIKKYGTHPSTGEKLDIKSLIKLNFHKNADGKYSCPVLFNVFTDNSHIVAIK
TTGNVFSYEAVDKLNIKGKNFLELITNEPFTRKDIITLQDPQHLDKFNLTNMHHIKHKLK
IPDEEDEQARQKPDYHLKSTNQETRETLAELYREYKGDKLLASTAPLPNKKIADKFNEAH
YSTGHTAAALMSTTYTPQTQSHRDVVDEDIVRFKYVQKKKKGYVRMQTNMGELNLELHCG
MVPKTCENFILLCQKGYYDGTIFHRSIRNFMIQGGDPTGTGKGGESAWGKPFKDEFKPNL
CHQGRGVLSMANSGPNSNGSQFFITFRSCTHLDRKHAVFGRLIGGLEVLQAIEKIDANPK
TDRPEKEIKIEKMTVLVNPFEEGDALLAADRQKALEEDEELEKARLPIVPKPVANAQPKT
YRSGIGKYIDMAAVKRRTDEGSVASSSGTAGPSSAKKLKTTSSR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcggcagcatcaaaaagacaagctgtacattacgtgcgctgaatggacacat
ctgtatggtggcaaaaagccagatggacccaaatcggacttccggagactgtcttttgat
cgctgtagtttgtcaatgctgccctttgagcacccgatgtgtacaccagatggcatcgtc
tttgatttcatgaacatctttccttggatcaagaagtacggaacgcatcccagcactggg
gagaaactggatataaagtctctcatcaagcttaatttccacaagaacgcagatgggaaa
tacagctgcccagtgctgttcaacgtcttcactgacaactctcacattgtggcgatcaag
acgacggggaatgtcttttcctacgaagctgttgataagctgaacatcaagggaaagaac
tttttggagctgataacaaatgagccgttcaccaggaaggacatcatcactctgcaggac
ccacaacaccttgacaagttcaacttgactaacatgcaccacatcaaacacaagctcaaa
ataccagatgaagaggatgagcaggcgcggcagaagccagactaccatctaaagtcgacg
aaccaggagacccgcgagacgctggccgagctgtaccgcgaatacaagggggacaagctg
ctggcctccaccgccccactgcccaacaagaagattgccgacaagttcaacgaggcacac
tactcgacgggtcatacggcagcggcattgatgtccacaacctacacgccacaaacgcag
agccatcgagatgtcgtggatgaggacatagtgcgcttcaagtacgtgcagaaaaagaag
aagggctacgtgcgcatgcaaaccaacatgggagaactcaacctggagctgcactgcggc
atggttcccaagacatgcgagaacttcattctgctgtgccagaagggctactacgatgga
accatattccatcggtcgatccgcaacttcatgattcagggtggagacccaacagggact
ggcaaagggggagagtcggcttggggcaagcccttcaaggatgaatttaagcctaaccta
tgccaccaggggcgtggagtgctgagcatggccaactctggacccaacagcaatgggtcc
caattcttcataacgttccgctcctgtacccatctggacagaaaacatgctgtcttcgga
cgcttgattggaggtttggaagtcctgcaagccatcgagaagatagatgccaaccccaag
actgatcgcccggagaaagaaatcaagattgagaaaatgacagtccttgtcaatcctttt
gaggaaggcgatgcactcttggcagctgatcggcagaaggctctggaagaggacgaggag
ctggagaaagctcgcctgccgatcgtccccaagcccgtagccaacgcccagcccaagacc
tatcgctccggcatcggcaaatacatcgacatggccgccgtgaagcgccgtacggatgaa
gggagcgtcgcatccagcagcggaaccgcggggccatcgtccgcgaagaaactcaagacc
acctcatcgcgttag
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