Petromyzon marinus (sea lamprey): 116939094
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Entry
116939094 CDS
T09614
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116939094 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116939094 (UBE3B)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116939094 (UBE3B)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
HECT type E3
116939094 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
116939094
NCBI-ProteinID:
XP_032802934
UniProt:
A0AAJ7SPM7
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Position
5:complement(10387308..10418124)
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AA seq
1128 aa
AA seq
DB search
MSSTRGLKVLRRRHWYGNLSCYKTCPWNVTAAWIKALSPLNSVSRDAEMFGAGAQSQSTR
AEFLDRARVAREERRGQRDRERAAIKIQALVRGFLCRRCIARRTRHEVDEFFSAQEASPA
KKNALCLFKIGQKLLFIFNTAEDIKRFEKFCRHLLSSMEEDNDSKVWYVSLALSKDYMLR
WIKQLKDVLSICCSYLKKLKPESILDTKQITLFLTVLVTFTDAGGWRMVRVKGDTFKISM
NLICANVMGHLNQKGLYPDLQILMTNGLARVVPTLNKATLTAVFTVALRPVVAAKFSENL
LRSFTLHVLSVPALVLHLSNIAPECLNMMSGHDLFRKVLTFLRQKDYQEDICICLEGTMS
LCLLGNLIMLALLNESLLEEETEAFSSLVTSVLTYCQKYVLQKKSNLTHWHPVLGWFAQS
MDYGLNEAMPAVTKQLQSLWGIRMIRVLFRDVLTRKLAEGQEPALATAPPTAAVPNDKPV
KSMFRKAFRRSAAVRSILRPVGGKRVDSPEVQRVCGVCVLYQTALTTLTQIRLQILTGLT
YLDDLLPKLWAFICELGPQGGLALFLECLSSDTEDSRCLLAMLTLFCDCSRHLITILDDI
ELYEEQVSFKLEELVTISSFLNTFVFKMIWDGILESEKTDRSQLFASVHSWLMTLYERDC
RRRFAPEDHWLKKDLKANVLFSELEKGKKRAKLLLQHIPHVLPHKDRVVLFRSMVAKEKS
SLVTGNQIVSLMDLNHGAPITHITVRRSRMLEDGYEQLSRLPPNSLKGTIRVKFINDLGM
DEAGIDQDGVFKEFLEEIIKKVFDPELNLFKITIGDERLYPSPTSYVHENHLQLMEFVGK
MLGKAVYEGIVVDVPFAPFFLSQVRGVHTSMPYSSIDELPSLDAEFYKNLTSIKRYDGDV
SELGLTFSYEEDIMGKLVCYELCPGGKTTLVTNENKISYIHMLAHHRMYVKIKKQTGAFI
HGFKSLISPEWMGMFSTPEMQRLIAGDTGEIDFEDLRKHTVYYGGFHNNHRVIIWLWDIL
TKEFTAQERAMFLKFVTSCSRPPLLGFAHLKPSFSIRCVEVADDQDTGDTLGSVLRGFFT
IRKKEPAGRLPTSSTCFNLLKLPNYSKKSVLRDKLRYAVSMNTGFELS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacacgtgggttgaaggttttacgcagacgtcattggtatggcaacctctcc
tgctacaagacatgcccatggaatgtgacagcagcttggattaaagctctttctccattg
aattctgtcagtagagacgcagagatgttcggcgcgggcgcccagagccaaagcactcgt
gccgagttcctggaccgagcgcgtgtggcgcgggaggagcggcgaggccagcgggatcga
gagcgtgccgccatcaagatccaagcactagtgcgcggcttcctgtgtcgccgatgcatt
gcccgccgcactcggcacgaggtggatgagtttttctctgcacaagaagccagtcctgca
aaaaagaatgctctctgtctgtttaaaattgggcagaagctactcttcatctttaacaca
gcagaagatatcaagaggtttgaaaagttctgccggcacttgctgagcagtatggaggag
gataacgactccaaggtgtggtatgtatccctggcactctctaaagactacatgctacgt
tggatcaaacagctcaaggacgtcctttcgatctgctgtagttacttaaagaaactaaag
ccggaaagtatcttggatacaaaacagatcacgctgtttctcacggtcctcgtgactttc
actgatgctgggggctggagaatggtgcgggtcaaaggtgacacttttaagatcagcatg
aatctcatctgtgcaaatgttatgggacatctgaaccagaaaggactctaccccgactta
cagatactaatgaccaacggactggcaagggttgtaccaactttgaacaaagctacactg
acagctgtattcacagttgcactacggcctgtggtcgcagccaagttttcggaaaacttg
ctaagatcattcacattacacgtgctgtccgttccggcgttagtgctgcacctgtccaat
attgcccccgagtgcttaaacatgatgtcaggacacgacttgtttcggaaagtcttgaca
ttcctgaggcagaaggattatcaagaggatatctgcatttgccttgaaggcaccatgtcc
ctttgtctgctcggaaatttaatcatgctggcattgttaaatgagagcttacttgaagag
gagacagaggcatttagtagcctggtgacttcagtgctgacctactgccagaaatatgtt
ctgcagaagaagtccaatctcactcactggcaccctgtacttggctggttcgcacagagc
atggattatgggctgaacgaggccatgcccgctgtgacgaagcagctgcagtcactgtgg
ggtattcgcatgatccgggtgctcttccgggacgtgctcacgcgcaagctggcagaggga
caggagccggccctggcaaccgccccacctactgccgccgtcccaaatgacaagcccgtg
aaaagcatgttccgaaaggcgttccggcgctctgcagccgtccgcagcatcctgcgaccg
gtgggcggcaaacgcgtggattcgcccgaggtgcagagggtgtgcggggtgtgtgtgctg
taccagacggcgctcaccacactcacgcagatccgcctccagatcctcaccggtctcacc
tatcttgacgatcttctgcccaagctgtgggccttcatctgtgagctgggacctcaaggt
ggcctcgctctctttctggagtgcctgagcagcgacacggaggactcgcgctgcttgctc
gctatgctcacgctcttctgcgactgctctcgacacctgatcacaatattggatgacatt
gagctgtacgaagagcaggtctccttcaagctggaggagctggttaccatttcttccttc
ctcaatacctttgttttcaagatgatctgggatggcattctagagagtgagaagaccgac
cgctcgcagctattcgcctcggtgcacagctggctcatgacgctgtacgagcgagactgc
aggaggaggtttgcgcctgaggaccactggcttaaaaaggacctgaaggcaaatgtcctg
ttctctgagctcgagaagggaaagaagagagccaaactgcttctccagcacatcccacat
gttcttccacacaaggatcgagttgtgctcttccggagcatggtggccaaggagaagtcc
agcctggtgacaggcaatcagatcgtgtccctaatggatttgaatcacggtgcgccaatc
acgcacatcaccgttcgccgctcacgaatgctggaggatggctacgaacagcttagccgg
ttgcccccaaactcgctgaaagggactatccgggtgaagttcattaacgaccttggcatg
gatgaggccggcattgatcaggacggtgtttttaaagaattcctggaggagataatcaag
aaggtgtttgaccctgaactcaacctcttcaagatcactattggggatgagcgtctctac
ccctcgcccacatcctatgtccatgagaaccacctccaactcatggagtttgtcggcaaa
atgctgggaaaggccgtctatgagggcattgtagtggatgtaccgtttgcgccgttcttc
ctgagtcaggtgcgcggagtgcacacatccatgccctacagctccatcgatgagctgccc
tcccttgatgctgagttctacaagaacctcacctccatcaagaggtatgatggagatgtg
agcgagttgggactgacgttttcgtacgaagaggatatcatgggaaaacttgtgtgctat
gaactttgccctggtggaaagacaacccttgtaacaaacgaaaacaagatcagctacatc
cacatgttggctcatcaccgcatgtacgtgaagatcaagaagcagacaggagcgttcatt
cacggattcaagtccctcatcagcccagagtggatgggcatgttttccacacccgagatg
cagcgtctcatcgccggtgacacgggcgagatcgactttgaggacctacggaaacacaca
gtctattatgggggcttccataacaaccaccgtgtgatcatatggctgtgggacattctc
actaaagagttcacagcccaggagagagcaatgtttctcaagtttgtgactagctgttcc
aggcctcccttattggggtttgcacatctcaagccatctttctccatcagatgtgtggag
gtcgctgatgaccaggacacaggcgacaccctgggcagcgtgctgcgggggtttttcacg
atccggaagaaggagccggccggccgtctccccacttcctccacctgcttcaacctgctc
aagctgcccaactacagcaagaagagcgtcctgcgagacaagctacgctacgctgtcagc
atgaatacgggattcgagctctcgtga
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